Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm23473-201ENSMUST00000158883 116 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm20415-201ENSMUST00000172877 423 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Mir7665-201ENSMUST00000184907 63 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm28163-201ENSMUST00000187099 325 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm38280-201ENSMUST00000192610 158 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm44903-201ENSMUST00000206840 130 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm29920-201ENSMUST00000206876 754 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm10038-201ENSMUST00000077233 441 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm23932-201ENSMUST00000082914 107 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm24921-201ENSMUST00000083024 107 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm26055-201ENSMUST00000083038 107 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm22578-201ENSMUST00000083730 107 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm23691-201ENSMUST00000101878 107 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm14731-201ENSMUST00000119216 376 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm12891-201ENSMUST00000119358 240 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm22316-201ENSMUST00000158012 216 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm37692-201ENSMUST00000192633 232 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm7039-201ENSMUST00000205138 346 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm44720-201ENSMUST00000206076 260 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm18488-201ENSMUST00000215082 364 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Mir466n-201ENSMUST00000104798 94 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm11367-201ENSMUST00000117802 120 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm11460-201ENSMUST00000118200 361 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm14669-201ENSMUST00000118841 250 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm23415-201ENSMUST00000175519 83 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm28200-201ENSMUST00000187778 315 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm29378-201ENSMUST00000188723 315 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm28909-201ENSMUST00000189406 315 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm33571-201ENSMUST00000193271 657 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.85□□□□□ -1.95
Scn4aQ9ER60 Gm6913-201ENSMUST00000100019 348 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm22761-201ENSMUST00000102278 96 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm13059-201ENSMUST00000119881 398 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Scn4aQ9ER60 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm24769-201ENSMUST00000158506 129 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm6395-201ENSMUST00000167639 691 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Scn4aQ9ER60 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm26960-201ENSMUST00000182263 412 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm30341-201ENSMUST00000194363 289 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Gm44332-201ENSMUST00000203712 433 ntBASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Scn4aQ9ER60 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm42805-201ENSMUST00000196158 276 ntBASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm44395-201ENSMUST00000197056 153 ntBASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm44425-201ENSMUST00000203739 429 ntBASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm44727-201ENSMUST00000204225 451 ntBASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm22304-201ENSMUST00000082688 129 ntBASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Gm25813-201ENSMUST00000082748 191 ntBASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Scn4aQ9ER60 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Gm24342-201ENSMUST00000103907 104 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Gm25728-201ENSMUST00000104525 159 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Gm22416-201ENSMUST00000158590 88 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Gm25119-201ENSMUST00000158815 88 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms