Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm43651-201ENSMUST00000199796 439 ntBASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 Gm43472-201ENSMUST00000200175 154 ntBASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 Gm23404-201ENSMUST00000082543 97 ntBASIC3.45□□□□□ -1.86
Nkx2-4Q9EQM3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm14518-201ENSMUST00000117351 542 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm9119-201ENSMUST00000118866 495 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm25621-201ENSMUST00000157223 114 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm24930-201ENSMUST00000158315 83 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm22434-201ENSMUST00000158549 122 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm3370-201ENSMUST00000171785 500 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm20656-201ENSMUST00000176925 518 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm29330-201ENSMUST00000190032 699 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm6510-201ENSMUST00000195916 574 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm45252-201ENSMUST00000211579 397 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Snord7-201ENSMUST00000083781 97 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm381-201ENSMUST00000117443 2037 ntBASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx2-4Q9EQM3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm12255-201ENSMUST00000117184 284 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm14355-201ENSMUST00000117352 264 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm11556-201ENSMUST00000120751 288 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm14333-201ENSMUST00000130484 264 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm25637-201ENSMUST00000157529 107 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm26195-201ENSMUST00000175035 101 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm28399-201ENSMUST00000186221 318 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm28572-201ENSMUST00000187444 318 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm38088-201ENSMUST00000195829 241 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm43723-201ENSMUST00000196886 189 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm43624-201ENSMUST00000197368 180 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm24350-202ENSMUST00000198309 132 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm19726-201ENSMUST00000205008 240 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm44521-201ENSMUST00000206469 217 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm18854-201ENSMUST00000211196 329 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm2436-201ENSMUST00000219562 774 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm24045-201ENSMUST00000083113 98 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Snora31-201ENSMUST00000083213 130 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm25579-201ENSMUST00000083407 106 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm23345-201ENSMUST00000083817 150 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm25512-201ENSMUST00000083863 107 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Nkx2-4Q9EQM3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm13761-201ENSMUST00000117238 807 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm14837-201ENSMUST00000119688 206 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm12872-201ENSMUST00000121835 320 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm23592-201ENSMUST00000157859 117 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm26028-201ENSMUST00000158660 294 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm24737-201ENSMUST00000158861 100 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm24666-201ENSMUST00000158937 167 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm24757-201ENSMUST00000176987 371 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm26866-201ENSMUST00000180414 802 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm44343-201ENSMUST00000196702 90 ntBASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.42□□□□□ -1.86
Nkx2-4Q9EQM3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms