Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm29469-201ENSMUST00000191448 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm42647-201ENSMUST00000195939 459 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm44419-201ENSMUST00000203338 229 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Mir21a-201ENSMUST00000083521 92 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm25308-201ENSMUST00000104171 158 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm13122-201ENSMUST00000118380 453 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm14562-201ENSMUST00000129885 543 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm22098-201ENSMUST00000157930 85 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm25519-201ENSMUST00000158392 127 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm25362-201ENSMUST00000158854 105 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm3370-201ENSMUST00000171785 500 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm26983-201ENSMUST00000182051 388 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm28629-201ENSMUST00000187309 263 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm43955-201ENSMUST00000204332 142 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm29818-201ENSMUST00000218070 165 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm9318-201ENSMUST00000222444 438 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm26447-201ENSMUST00000082448 129 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm7381-201ENSMUST00000098958 300 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.57□□□□□ -1.68
Upf1Q9EPU0 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm12311-201ENSMUST00000118803 374 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm2862-201ENSMUST00000161524 328 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm23047-201ENSMUST00000177661 94 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm24019-201ENSMUST00000178620 107 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm26243-201ENSMUST00000179260 107 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm42666-201ENSMUST00000201954 152 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm44475-201ENSMUST00000204041 424 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm23296-201ENSMUST00000082555 107 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm24859-201ENSMUST00000082729 107 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Snord14e-201ENSMUST00000082857 90 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Upf1Q9EPU0 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Mir294-201ENSMUST00000104710 84 ntBASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm13876-201ENSMUST00000118451 261 ntBASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm16021-201ENSMUST00000121176 219 ntBASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm22598-201ENSMUST00000157600 127 ntBASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm36891-201ENSMUST00000191995 655 ntBASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm8242-202ENSMUST00000193056 475 ntBASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm26066-201ENSMUST00000083385 109 ntBASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Upf1Q9EPU0 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.54□□□□□ -1.68
Upf1Q9EPU0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upf1Q9EPU0 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upf1Q9EPU0 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.54□□□□□ -1.68
Upf1Q9EPU0 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.54□□□□□ -1.68
Upf1Q9EPU0 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Upf1Q9EPU0 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms