Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm22555-201ENSMUST00000157801 62 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm26173-201ENSMUST00000158416 136 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm3104-201ENSMUST00000171004 473 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm29550-201ENSMUST00000185543 285 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm29045-201ENSMUST00000187278 698 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm38261-201ENSMUST00000192608 316 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm23932-201ENSMUST00000082914 107 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Gm23516-201ENSMUST00000093728 107 ntBASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Ccdc39Q9D5Y1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Mir669o-201ENSMUST00000103898 96 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm11490-201ENSMUST00000118128 272 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm23885-201ENSMUST00000122682 294 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm23212-201ENSMUST00000122718 60 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm16533-201ENSMUST00000140035 228 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm26411-201ENSMUST00000157668 107 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Mir3092-201ENSMUST00000174954 96 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm8676-201ENSMUST00000184206 637 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm27608-201ENSMUST00000184822 162 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm18551-201ENSMUST00000195594 642 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm29754-201ENSMUST00000206269 358 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm45439-201ENSMUST00000211723 359 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm24622-201ENSMUST00000082619 162 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm22154-201ENSMUST00000083844 131 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm10343-201ENSMUST00000096279 348 ntBASIC3.03□□□□□ -1.92
Ccdc39Q9D5Y1 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.03□□□□□ -1.93
Ccdc39Q9D5Y1 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm26341-201ENSMUST00000104561 134 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm6574-201ENSMUST00000120037 362 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm24075-201ENSMUST00000158175 72 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm20415-201ENSMUST00000172877 423 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm23269-201ENSMUST00000178701 107 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm28650-201ENSMUST00000188413 411 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm19224-201ENSMUST00000190477 793 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm29950-201ENSMUST00000195273 237 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm2446-201ENSMUST00000220144 772 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Gm6030-201ENSMUST00000078768 402 ntBASIC3.02□□□□□ -1.93
Ccdc39Q9D5Y1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm6923-201ENSMUST00000118343 406 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm12044-201ENSMUST00000120335 213 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm24211-201ENSMUST00000158264 107 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm16588-201ENSMUST00000162889 355 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm17054-201ENSMUST00000169811 259 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm25874-201ENSMUST00000178030 79 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Mir7j-201ENSMUST00000184427 122 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Mir6372-201ENSMUST00000185114 109 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm6615-201ENSMUST00000199426 631 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm15235-201ENSMUST00000200572 194 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm17991-201ENSMUST00000208139 297 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Snord7-201ENSMUST00000083781 97 ntBASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc39Q9D5Y1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 Gm5937-201ENSMUST00000119715 643 ntBASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 Gm12006-201ENSMUST00000120786 403 ntBASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 Gm11392-201ENSMUST00000181419 710 ntBASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3□□□□□ -1.93
Ccdc39Q9D5Y1 Gm28900-201ENSMUST00000185232 156 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms