Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Clp1Q99LI9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm26500-201ENSMUST00000101867 106 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm13787-201ENSMUST00000120422 168 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm25817-201ENSMUST00000177758 121 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm24766-201ENSMUST00000179182 121 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm27899-201ENSMUST00000184715 64 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm19774-201ENSMUST00000190667 114 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm37713-201ENSMUST00000191746 198 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm32222-201ENSMUST00000203296 298 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.63□□□□□ -1.67
Clp1Q99LI9 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm22806-201ENSMUST00000082738 136 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm22685-201ENSMUST00000082848 106 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm25482-201ENSMUST00000083225 107 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Mir32-201ENSMUST00000083610 70 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm22353-201ENSMUST00000083918 136 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm43326-201ENSMUST00000198459 1638 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Clp1Q99LI9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm11065-201ENSMUST00000111462 228 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm15799-201ENSMUST00000120899 289 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.62□□□□□ -1.67
Clp1Q99LI9 Mir713-201ENSMUST00000178651 108 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Mir7658-201ENSMUST00000184043 57 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm37361-201ENSMUST00000194345 132 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm43853-201ENSMUST00000197162 301 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm42578-201ENSMUST00000199960 194 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm17779-201ENSMUST00000213395 394 ntBASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Clp1Q99LI9 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm24281-201ENSMUST00000104234 136 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm15002-201ENSMUST00000118406 452 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm22911-201ENSMUST00000177920 107 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm27803-201ENSMUST00000183763 119 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Mir6345-201ENSMUST00000184286 128 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm4248-201ENSMUST00000196905 316 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm7468-201ENSMUST00000203900 652 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Mir132-201ENSMUST00000083603 66 ntBASIC4.61□□□□□ -1.67
Clp1Q99LI9 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clp1Q99LI9 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm24581-201ENSMUST00000103962 133 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Snord72-201ENSMUST00000104549 81 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm24403-201ENSMUST00000104616 130 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm15313-201ENSMUST00000119179 282 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms