Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb20Q91XZ9 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Pcdhb20Q91XZ9 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
Pcdhb20Q91XZ9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb20Q91XZ9 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Pcdhb20Q91XZ9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb20Q91XZ9 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb20Q91XZ9 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.21□□□□□ -1.57
Pcdhb20Q91XZ9 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Pcdhb20Q91XZ9 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Pcdhb20Q91XZ9 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm26135-201ENSMUST00000101993 72 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm23230-201ENSMUST00000157298 133 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm22586-201ENSMUST00000157507 122 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm23589-201ENSMUST00000157660 105 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm24959-201ENSMUST00000157924 146 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Snord50b-201ENSMUST00000178497 72 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 AC122834.1-201ENSMUST00000227182 425 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdhb20Q91XZ9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm25758-201ENSMUST00000103987 129 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm14871-201ENSMUST00000119056 194 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm22490-201ENSMUST00000157188 119 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm24507-201ENSMUST00000157683 134 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm26160-201ENSMUST00000158965 63 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm27541-201ENSMUST00000184078 122 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm42834-201ENSMUST00000196845 256 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm43444-201ENSMUST00000198123 291 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm15235-201ENSMUST00000200572 194 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 AC107864.1-201ENSMUST00000217937 496 ntBASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Pcdhb20Q91XZ9 Gm10811-201ENSMUST00000221985 2448 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm26051-201ENSMUST00000104642 93 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm15803-201ENSMUST00000120118 394 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm13537-201ENSMUST00000120467 267 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm23080-201ENSMUST00000157846 103 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm43676-201ENSMUST00000197532 540 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm18429-201ENSMUST00000198707 421 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm24525-201ENSMUST00000082917 151 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.19□□□□□ -1.58
Pcdhb20Q91XZ9 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm22273-201ENSMUST00000104040 132 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm13155-201ENSMUST00000119277 646 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm14601-201ENSMUST00000120892 236 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm8178-201ENSMUST00000121570 646 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm23101-201ENSMUST00000157550 137 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm24295-201ENSMUST00000158298 131 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Mir1963-201ENSMUST00000158594 59 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm27793-201ENSMUST00000183405 76 ntBASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC5.18□□□□□ -1.58
Pcdhb20Q91XZ9 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms