Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Mir127-201ENSMUST00000093568 70 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm13581-201ENSMUST00000120675 278 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm12071-201ENSMUST00000121968 469 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm26195-201ENSMUST00000175035 101 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm20648-201ENSMUST00000175815 328 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm43286-201ENSMUST00000197420 424 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm44058-201ENSMUST00000204335 467 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.03□□□□□ -2.08
Lsm1Q8VC85 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.03□□□□□ -2.08
Lsm1Q8VC85 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Lsm1Q8VC85 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm24907-201ENSMUST00000116932 128 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm15692-201ENSMUST00000152173 352 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm23391-201ENSMUST00000157579 104 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm43865-201ENSMUST00000204721 127 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm18000-201ENSMUST00000212153 800 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Gm46146-201ENSMUST00000217483 346 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Lsm1Q8VC85 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm23691-201ENSMUST00000101878 107 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm15896-201ENSMUST00000118045 440 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm11268-201ENSMUST00000118347 267 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm11598-201ENSMUST00000119257 357 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm15067-201ENSMUST00000119534 156 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm15760-201ENSMUST00000119553 283 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm14848-201ENSMUST00000121850 467 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm24908-201ENSMUST00000157294 127 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm26348-201ENSMUST00000157528 240 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm24237-201ENSMUST00000157790 132 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm25460-201ENSMUST00000157954 127 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm25863-201ENSMUST00000158249 329 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20794-201ENSMUST00000177626 628 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm28356-202ENSMUST00000187566 858 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20885-201ENSMUST00000190192 654 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm33571-201ENSMUST00000193271 657 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm36866-201ENSMUST00000193343 657 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm36047-201ENSMUST00000193659 657 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Trbv18-201ENSMUST00000194256 294 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20857-201ENSMUST00000194766 657 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm20858-201ENSMUST00000195459 657 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm30638-201ENSMUST00000195570 656 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm43978-201ENSMUST00000203491 451 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.01□□□□□ -2.09
Lsm1Q8VC85 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms