Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm26156-201ENSMUST00000116999 123 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm11582-201ENSMUST00000121041 236 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm14972-201ENSMUST00000121780 364 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm22718-201ENSMUST00000122701 315 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm20534-201ENSMUST00000172957 172 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm26746-201ENSMUST00000181722 487 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm44409-201ENSMUST00000198810 166 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm5322-201ENSMUST00000206142 699 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm44824-201ENSMUST00000207021 229 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm35857-201ENSMUST00000212739 178 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
Ushbp1Q8R370 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.09□□□□□ -1.76
Ushbp1Q8R370 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Ushbp1Q8R370 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm14001-201ENSMUST00000118847 247 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 AA413626-201ENSMUST00000121125 494 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm12276-201ENSMUST00000121709 301 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm25624-201ENSMUST00000157222 275 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm23234-201ENSMUST00000157304 134 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm44355-201ENSMUST00000200417 104 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Gm25929-201ENSMUST00000082784 107 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Snora31-201ENSMUST00000083213 130 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Mir452-201ENSMUST00000093629 85 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ushbp1Q8R370 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Mir669g-201ENSMUST00000116809 123 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Gm14823-201ENSMUST00000117698 238 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Gm25835-201ENSMUST00000158917 144 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Snord92-201ENSMUST00000175548 85 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Gm23793-201ENSMUST00000179396 117 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Gm45101-201ENSMUST00000208327 232 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Gm45420-201ENSMUST00000211243 425 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Mir21a-201ENSMUST00000083521 92 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 AF357428-201ENSMUST00000083815 69 ntBASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ushbp1Q8R370 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm23169-201ENSMUST00000157157 112 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm3370-201ENSMUST00000171785 500 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Mir6917-201ENSMUST00000184111 61 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm28591-201ENSMUST00000185259 183 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm28058-201ENSMUST00000186421 264 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm44475-201ENSMUST00000204041 424 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm45080-201ENSMUST00000206648 283 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm45730-201ENSMUST00000212560 395 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm7692-201ENSMUST00000213534 409 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms