Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm43955-201ENSMUST00000204332 142 ntBASIC3.74□□□□□ -1.81
Clrn1Q8K445 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.74□□□□□ -1.81
Clrn1Q8K445 Gm44853-201ENSMUST00000209070 250 ntBASIC3.74□□□□□ -1.81
Clrn1Q8K445 Gm45315-201ENSMUST00000209283 333 ntBASIC3.74□□□□□ -1.81
Clrn1Q8K445 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.74□□□□□ -1.81
Clrn1Q8K445 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.74□□□□□ -1.81
Clrn1Q8K445 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.74□□□□□ -1.81
Clrn1Q8K445 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.74□□□□□ -1.81
Clrn1Q8K445 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Clrn1Q8K445 Mir504-201ENSMUST00000093602 79 ntBASIC3.74□□□□□ -1.81
Clrn1Q8K445 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Clrn1Q8K445 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm24079-201ENSMUST00000104352 132 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm11931-201ENSMUST00000121630 447 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm12956-201ENSMUST00000122184 414 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm26001-201ENSMUST00000157989 103 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Snora15-201ENSMUST00000177461 131 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm27952-201ENSMUST00000184748 105 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm7871-201ENSMUST00000195346 618 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm44881-201ENSMUST00000205425 367 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm44513-201ENSMUST00000206811 439 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Clrn1Q8K445 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm25401-201ENSMUST00000082975 106 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Mir370-201ENSMUST00000083499 79 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Svet1-201ENSMUST00000209370 3940 ntBASIC3.73□□□□□ -1.81
Clrn1Q8K445 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Clrn1Q8K445 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm14792-201ENSMUST00000119725 258 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm22107-201ENSMUST00000122548 100 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm23960-201ENSMUST00000157206 131 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm25220-201ENSMUST00000157546 95 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm6374-201ENSMUST00000159051 788 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Clrn1Q8K445 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm27733-201ENSMUST00000184803 68 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm27997-201ENSMUST00000184942 69 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm28288-201ENSMUST00000191019 214 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm42647-201ENSMUST00000195939 459 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm9379-201ENSMUST00000196790 646 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm44475-201ENSMUST00000204041 424 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm5548-201ENSMUST00000055878 397 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Clrn1Q8K445 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm650-201ENSMUST00000144428 1551 ntBASIC3.72□□□□□ -1.81
Clrn1Q8K445 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.71□□□□□ -1.81
Clrn1Q8K445 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Clrn1Q8K445 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Clrn1Q8K445 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm4736-201ENSMUST00000100870 380 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm15526-201ENSMUST00000112504 204 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm13343-201ENSMUST00000116474 105 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm12252-201ENSMUST00000119517 219 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm12815-201ENSMUST00000121737 135 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms