Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37119-201ENSMUST00000195691 389 ntBASIC1.11□□□□□ -2.23
Col6a6Q8C6K9 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Col6a6Q8C6K9 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Col6a6Q8C6K9 Gm25856-201ENSMUST00000082786 75 ntBASIC1.11□□□□□ -2.23
Col6a6Q8C6K9 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Col6a6Q8C6K9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm15001-201ENSMUST00000117657 795 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm14815-201ENSMUST00000120060 488 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm2005-201ENSMUST00000120759 542 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm11819-201ENSMUST00000122192 372 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm44666-201ENSMUST00000208544 391 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm23096-201ENSMUST00000083447 107 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm25409-201ENSMUST00000083764 131 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm23008-201ENSMUST00000158946 80 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm6059-201ENSMUST00000196903 340 ntBASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a6Q8C6K9 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm11483-201ENSMUST00000119839 247 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm14069-201ENSMUST00000120815 229 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm42438-201ENSMUST00000197832 974 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm45456-201ENSMUST00000210841 243 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm29809-201ENSMUST00000218423 493 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm19563-201ENSMUST00000222031 270 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
Col6a6Q8C6K9 Gm14898-201ENSMUST00000120202 645 ntBASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Gm24965-201ENSMUST00000157922 106 ntBASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Gm20526-201ENSMUST00000173416 158 ntBASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Gm16261-201ENSMUST00000096813 205 ntBASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.24
Col6a6Q8C6K9 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm28169-201ENSMUST00000190342 345 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm43991-201ENSMUST00000203751 274 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm18892-201ENSMUST00000217628 881 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm25416-201ENSMUST00000104221 107 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm11893-201ENSMUST00000117829 491 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm5317-201ENSMUST00000204445 847 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Col6a6Q8C6K9 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 Gm22658-201ENSMUST00000104196 155 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 Gm19932-201ENSMUST00000177033 313 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 Gm45696-201ENSMUST00000212088 985 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 Mir221-201ENSMUST00000083488 95 ntBASIC1.07□□□□□ -2.24
Col6a6Q8C6K9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm22389-201ENSMUST00000158193 301 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm25658-201ENSMUST00000158472 128 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm44520-201ENSMUST00000205447 802 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm13331-201ENSMUST00000117500 448 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms