Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm12902-201ENSMUST00000118389 322 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm14926-201ENSMUST00000120650 508 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm7327-201ENSMUST00000120925 652 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm14577-201ENSMUST00000121134 256 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm25749-201ENSMUST00000175485 111 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21842-201ENSMUST00000177552 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21626-201ENSMUST00000177791 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21562-201ENSMUST00000177888 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21539-201ENSMUST00000177925 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21599-201ENSMUST00000178249 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21914-201ENSMUST00000178452 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21723-201ENSMUST00000178692 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21916-201ENSMUST00000178771 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21801-201ENSMUST00000178865 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21633-201ENSMUST00000178941 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21821-201ENSMUST00000179646 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21588-201ENSMUST00000180074 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21780-201ENSMUST00000180128 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21572-201ENSMUST00000180134 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm21529-201ENSMUST00000180175 498 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm24518-201ENSMUST00000180275 94 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm29370-202ENSMUST00000187476 499 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm9712-201ENSMUST00000210842 311 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm24605-201ENSMUST00000104772 96 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm14622-201ENSMUST00000117117 468 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm6274-201ENSMUST00000118173 797 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm11830-201ENSMUST00000120175 561 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm26020-201ENSMUST00000122729 183 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm24537-201ENSMUST00000157950 102 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm24730-201ENSMUST00000158228 117 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm29665-201ENSMUST00000191457 528 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm43217-201ENSMUST00000199513 367 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm45859-201ENSMUST00000212794 214 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Gm26164-201ENSMUST00000083793 104 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.81□□□□□ -1.64
Usp40Q8BWR4 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm24118-201ENSMUST00000103972 126 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm15223-201ENSMUST00000120989 826 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm12785-201ENSMUST00000122052 172 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm36954-201ENSMUST00000195362 363 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm42666-201ENSMUST00000201954 152 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm44609-201ENSMUST00000207157 460 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm39147-201ENSMUST00000211376 465 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm45704-201ENSMUST00000212582 403 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm19790-201ENSMUST00000214414 251 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Gm22974-201ENSMUST00000083301 103 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Mir504-201ENSMUST00000093602 79 ntBASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp40Q8BWR4 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm25920-201ENSMUST00000158307 99 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Mir3112-201ENSMUST00000175431 82 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm27249-201ENSMUST00000185049 328 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm19498-201ENSMUST00000191128 331 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Gm38044-201ENSMUST00000192964 487 ntBASIC4.79□□□□□ -1.64
Usp40Q8BWR4 Mir7682-201ENSMUST00000198467 58 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms