Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.58□□□□□ -2
Atg4bQ8BGE6 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Atg4bQ8BGE6 Mir878-201ENSMUST00000104680 78 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm25539-201ENSMUST00000116886 122 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm12225-201ENSMUST00000117995 298 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm13720-201ENSMUST00000120741 196 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm12368-201ENSMUST00000122251 434 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm13424-201ENSMUST00000122301 354 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm22452-201ENSMUST00000122804 104 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm23668-201ENSMUST00000157465 111 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm8207-201ENSMUST00000171204 502 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Snord53-201ENSMUST00000175146 78 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm24464-201ENSMUST00000179697 107 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Mir7242-201ENSMUST00000183710 79 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm27698-201ENSMUST00000184060 249 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.58□□□□□ -2
Atg4bQ8BGE6 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.58□□□□□ -2
Atg4bQ8BGE6 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.58□□□□□ -2
Atg4bQ8BGE6 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm24150-201ENSMUST00000082759 104 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm26458-201ENSMUST00000082832 128 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm25411-201ENSMUST00000083760 151 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Gm23741-201ENSMUST00000097237 171 ntBASIC2.58□□□□□ -2
Atg4bQ8BGE6 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm23409-201ENSMUST00000158516 237 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm24736-201ENSMUST00000158862 130 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm25361-201ENSMUST00000179358 76 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.57□□□□□ -2
Atg4bQ8BGE6 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Trbv22-201ENSMUST00000191697 291 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm44324-201ENSMUST00000198517 135 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm8041-201ENSMUST00000199755 616 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm44041-201ENSMUST00000203678 396 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm2676-201ENSMUST00000207279 606 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm22974-201ENSMUST00000083301 103 ntBASIC2.57□□□□□ -2
Atg4bQ8BGE6 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.57□□□□□ -2
Atg4bQ8BGE6 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm14918-201ENSMUST00000118153 268 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm8858-201ENSMUST00000118259 342 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm13602-201ENSMUST00000122405 493 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.56□□□□□ -2
Atg4bQ8BGE6 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.56□□□□□ -2
Atg4bQ8BGE6 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm22853-201ENSMUST00000174974 131 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm24315-201ENSMUST00000177835 127 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm27786-201ENSMUST00000184337 70 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm30341-201ENSMUST00000194363 289 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm44923-201ENSMUST00000206673 85 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm44600-201ENSMUST00000208540 111 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.56□□□□□ -2
Atg4bQ8BGE6 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Mir193a-201ENSMUST00000083461 66 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.56□□□□□ -2
Atg4bQ8BGE6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.56□□□□□ -2
Atg4bQ8BGE6 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Atg4bQ8BGE6 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Atg4bQ8BGE6 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.55□□□□□ -2
Atg4bQ8BGE6 Gm22658-201ENSMUST00000104196 155 ntBASIC2.55□□□□□ -2
Atg4bQ8BGE6 Gm22771-201ENSMUST00000104449 91 ntBASIC2.55□□□□□ -2
Atg4bQ8BGE6 Gm12787-201ENSMUST00000119234 396 ntBASIC2.55□□□□□ -2
Atg4bQ8BGE6 Gm14159-201ENSMUST00000119832 451 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms