Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm23322-201ENSMUST00000104464 167 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm26101-201ENSMUST00000157246 105 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm23829-201ENSMUST00000157392 270 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm27828-201ENSMUST00000184108 119 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm29334-201ENSMUST00000190334 357 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm45796-201ENSMUST00000212483 114 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm8274-201ENSMUST00000219820 463 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim56Q80VI1 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Gm43326-201ENSMUST00000198459 1638 ntBASIC4.67□□□□□ -1.66
Trim56Q80VI1 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim56Q80VI1 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Mir466h-201ENSMUST00000104748 81 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm22814-201ENSMUST00000157452 104 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm23921-201ENSMUST00000175258 107 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm29429-201ENSMUST00000187071 121 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm9379-201ENSMUST00000196790 646 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm44881-201ENSMUST00000205425 367 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm44844-201ENSMUST00000207242 336 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm45315-201ENSMUST00000209283 333 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm45296-201ENSMUST00000209625 205 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm3829-201ENSMUST00000222362 619 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm22571-201ENSMUST00000082984 70 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm24316-201ENSMUST00000083041 107 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Mir10a-201ENSMUST00000083585 110 ntBASIC4.66□□□□□ -1.66
Trim56Q80VI1 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim56Q80VI1 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Trim56Q80VI1 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Trim56Q80VI1 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Trim56Q80VI1 Gm13692-201ENSMUST00000120774 371 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm27723-201ENSMUST00000157398 63 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm23098-201ENSMUST00000157552 299 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm22889-201ENSMUST00000158639 58 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.65□□□□□ -1.67
Trim56Q80VI1 Mir713-201ENSMUST00000178651 108 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm26585-201ENSMUST00000180890 630 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm27477-201ENSMUST00000184649 143 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm28920-201ENSMUST00000189957 699 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm25203-202ENSMUST00000200458 216 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm44977-201ENSMUST00000205283 420 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim56Q80VI1 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm25203-201ENSMUST00000082842 215 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm24457-201ENSMUST00000083196 105 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Mir30e-201ENSMUST00000083475 92 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim56Q80VI1 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.65□□□□□ -1.67
Trim56Q80VI1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim56Q80VI1 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim56Q80VI1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms