Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm27718-201ENSMUST00000183721 86 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm18982-201ENSMUST00000198118 529 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm44960-201ENSMUST00000207403 141 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm10088-201ENSMUST00000074116 423 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm25698-201ENSMUST00000082897 107 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm43663-201ENSMUST00000198643 1505 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm12042-201ENSMUST00000120479 301 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm12071-201ENSMUST00000121968 469 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm23232-201ENSMUST00000157300 105 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm23554-201ENSMUST00000157818 110 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm24675-201ENSMUST00000158757 259 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm22308-201ENSMUST00000177609 107 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm43583-201ENSMUST00000199235 303 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm42578-201ENSMUST00000199960 194 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Gm22997-201ENSMUST00000082845 107 ntBASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scaf1Q5U4C3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.48
Scaf1Q5U4C3 Gm5596-201ENSMUST00000207988 2421 ntBASIC5.84□□□□□ -1.48
Scaf1Q5U4C3 Gm15102-201ENSMUST00000118740 1502 ntBASIC5.84□□□□□ -1.48
Scaf1Q5U4C3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm12062-201ENSMUST00000117533 259 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm25177-201ENSMUST00000122634 117 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm23586-201ENSMUST00000157657 123 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm23496-201ENSMUST00000157741 248 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm25386-201ENSMUST00000157814 288 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm24745-201ENSMUST00000157840 85 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm23760-201ENSMUST00000158350 116 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm44650-201ENSMUST00000206929 194 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm37941-201ENSMUST00000192170 2309 ntBASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scaf1Q5U4C3 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm36944-201ENSMUST00000192257 2759 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm11819-201ENSMUST00000122192 372 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm22204-201ENSMUST00000122654 327 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm23196-201ENSMUST00000158806 107 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm17100-201ENSMUST00000168963 272 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm27896-201ENSMUST00000175162 317 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm27796-201ENSMUST00000183863 261 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm28304-201ENSMUST00000185977 312 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm29256-201ENSMUST00000189094 312 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm28484-201ENSMUST00000190606 312 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Trbv11-201ENSMUST00000194354 260 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Mir3535-201ENSMUST00000197651 147 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm44010-201ENSMUST00000204432 331 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.82□□□□□ -1.48
Scaf1Q5U4C3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm8129-201ENSMUST00000118230 213 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm25450-201ENSMUST00000179144 107 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm27520-201ENSMUST00000184872 81 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm29334-201ENSMUST00000190334 357 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm42570-201ENSMUST00000195937 292 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Mir7661-201ENSMUST00000197023 61 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 AC125374.2-201ENSMUST00000214278 162 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 AC164100.1-201ENSMUST00000227214 508 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 AC113031.4-201ENSMUST00000228381 514 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm23625-201ENSMUST00000082457 100 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Gm23454-201ENSMUST00000083332 133 ntBASIC5.81□□□□□ -1.48
Scaf1Q5U4C3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 165.2 ms