Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm22611-201ENSMUST00000158288 150 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm23409-201ENSMUST00000158516 237 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm22416-201ENSMUST00000158590 88 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm25119-201ENSMUST00000158815 88 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm8338-201ENSMUST00000163928 363 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm24264-201ENSMUST00000179835 94 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm29216-201ENSMUST00000187117 492 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm5116-201ENSMUST00000187732 463 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm29627-201ENSMUST00000187984 463 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm19252-201ENSMUST00000204705 305 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm18160-201ENSMUST00000214279 827 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm18703-201ENSMUST00000215318 333 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Gm20304-201ENSMUST00000218168 444 ntBASIC2.88□□□□□ -1.95
Trim38Q5SZ99 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.88□□□□□ -1.95
Trim38Q5SZ99 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trim38Q5SZ99 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim38Q5SZ99 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm24126-201ENSMUST00000104111 106 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm14973-201ENSMUST00000117248 255 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm14602-201ENSMUST00000118625 340 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 DQ267100-201ENSMUST00000122600 72 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm23137-201ENSMUST00000157559 107 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm24138-201ENSMUST00000157572 114 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm23865-201ENSMUST00000157723 97 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm23078-201ENSMUST00000157848 148 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm4540-201ENSMUST00000170669 429 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Snord53-201ENSMUST00000175146 78 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm37029-201ENSMUST00000195773 239 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm8041-201ENSMUST00000199755 616 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm43284-201ENSMUST00000200103 253 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm44961-201ENSMUST00000207450 196 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm26458-201ENSMUST00000082832 128 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Gm24948-201ENSMUST00000082866 207 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trim38Q5SZ99 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.87□□□□□ -1.95
Trim38Q5SZ99 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm12878-201ENSMUST00000118744 332 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm24736-201ENSMUST00000158862 130 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm24813-201ENSMUST00000175310 84 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Mir7047-201ENSMUST00000184595 64 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm17946-201ENSMUST00000186856 538 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm45772-201ENSMUST00000212961 240 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim38Q5SZ99 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Gm23615-201ENSMUST00000082602 65 ntBASIC2.86□□□□□ -1.95
Trim38Q5SZ99 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim38Q5SZ99 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm22486-201ENSMUST00000116815 137 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm25102-201ENSMUST00000122479 112 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm3470-201ENSMUST00000160819 420 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm22131-201ENSMUST00000178415 94 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm25670-201ENSMUST00000178423 107 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm26239-201ENSMUST00000178842 107 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm24267-201ENSMUST00000179841 107 ntBASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Trim38Q5SZ99 Mir7242-201ENSMUST00000183710 79 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms