Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm28399-201ENSMUST00000186221 318 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm28572-201ENSMUST00000187444 318 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm28356-202ENSMUST00000187566 858 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm20885-201ENSMUST00000190192 654 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm37449-201ENSMUST00000193016 270 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm33571-201ENSMUST00000193271 657 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm36866-201ENSMUST00000193343 657 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm36047-201ENSMUST00000193659 657 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm20857-201ENSMUST00000194766 657 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm20858-201ENSMUST00000195459 657 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm18658-201ENSMUST00000195558 270 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm30638-201ENSMUST00000195570 656 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav2Q5R1I9 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.81□□□□□ -2.12
Trav2Q5R1I9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav2Q5R1I9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm12889-201ENSMUST00000118684 241 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm15497-201ENSMUST00000119137 551 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm12956-201ENSMUST00000122184 414 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm24937-201ENSMUST00000122597 134 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm24900-201ENSMUST00000158128 134 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm16561-201ENSMUST00000163001 192 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm25642-201ENSMUST00000175137 66 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm26622-201ENSMUST00000180520 298 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm27959-201ENSMUST00000185172 111 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm28627-201ENSMUST00000186141 453 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm43659-201ENSMUST00000200894 628 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gm44472-201ENSMUST00000204922 943 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 AC131068.1-201ENSMUST00000226891 482 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav2Q5R1I9 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Mir93-201ENSMUST00000083593 88 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.8□□□□□ -2.12
Trav2Q5R1I9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm14794-201ENSMUST00000118181 192 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm16355-201ENSMUST00000128606 231 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm22227-201ENSMUST00000157356 259 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm24769-201ENSMUST00000158506 129 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm22664-201ENSMUST00000158719 105 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm29604-201ENSMUST00000187176 163 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm34701-202ENSMUST00000204685 360 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm25130-201ENSMUST00000082650 156 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm25402-201ENSMUST00000082966 131 ntBASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav2Q5R1I9 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm25094-201ENSMUST00000103992 131 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm25485-201ENSMUST00000104120 132 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Mir344e-201ENSMUST00000104677 66 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm7974-201ENSMUST00000117154 408 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm15844-201ENSMUST00000118016 576 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm25339-201ENSMUST00000157458 232 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm23642-201ENSMUST00000157858 258 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm20058-201ENSMUST00000186939 284 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm44083-201ENSMUST00000203114 337 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm44844-201ENSMUST00000207242 336 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.78□□□□□ -2.12
Trav2Q5R1I9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Trav2Q5R1I9 Gm23472-201ENSMUST00000101806 191 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm13331-201ENSMUST00000117500 448 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 124.9 ms