Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Trbv7-201ENSMUST00000193339 402 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm43193-201ENSMUST00000197732 441 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm8041-201ENSMUST00000199755 616 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm46146-201ENSMUST00000217483 346 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm22154-201ENSMUST00000083844 131 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm24698-201ENSMUST00000083883 130 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm26342-201ENSMUST00000104557 129 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm14918-201ENSMUST00000118153 268 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm12721-201ENSMUST00000120621 268 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm15223-201ENSMUST00000120989 826 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm24237-201ENSMUST00000157790 132 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm24358-201ENSMUST00000158424 288 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm17162-201ENSMUST00000168538 473 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm28755-201ENSMUST00000185773 199 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm34701-202ENSMUST00000204685 360 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm45439-201ENSMUST00000211723 359 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm23247-201ENSMUST00000083373 107 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Upf3bQ3ULL6 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm25094-201ENSMUST00000103992 131 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Mir344e-201ENSMUST00000104677 66 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm12386-201ENSMUST00000117380 688 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm12871-201ENSMUST00000118758 438 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm26275-201ENSMUST00000157101 268 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm23387-201ENSMUST00000158586 107 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Mir7068-201ENSMUST00000183439 74 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm27942-201ENSMUST00000184669 101 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm28439-201ENSMUST00000187714 876 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm3489-201ENSMUST00000190083 528 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm18341-201ENSMUST00000197538 622 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm45912-201ENSMUST00000210646 543 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm2446-201ENSMUST00000220144 772 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm26055-201ENSMUST00000083038 107 ntBASIC2.26□□□□□ -2.05
Upf3bQ3ULL6 Gm14879-201ENSMUST00000117308 507 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm26105-201ENSMUST00000157253 190 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm4468-201ENSMUST00000170206 294 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm25642-201ENSMUST00000175137 66 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm43083-201ENSMUST00000199594 476 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm44256-201ENSMUST00000203304 335 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm18252-203ENSMUST00000215855 757 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm26206-201ENSMUST00000082908 110 ntBASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Upf3bQ3ULL6 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm23551-201ENSMUST00000116852 121 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm6923-201ENSMUST00000118343 406 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm13640-201ENSMUST00000118445 264 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm11357-201ENSMUST00000119758 954 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms