Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Mir669g-201ENSMUST00000116809 123 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm14811-201ENSMUST00000117070 117 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm13046-201ENSMUST00000117391 501 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm14570-201ENSMUST00000119444 391 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm14761-201ENSMUST00000121363 262 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm14821-201ENSMUST00000121975 435 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Mir6413-201ENSMUST00000184049 108 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm19498-201ENSMUST00000191128 331 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf180Q3U827 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm44391-201ENSMUST00000198490 93 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm44964-201ENSMUST00000207011 273 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.33□□□□□ -1.72
Rnf180Q3U827 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Rnf180Q3U827 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm15142-201ENSMUST00000121013 856 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm14694-201ENSMUST00000121856 282 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm25621-201ENSMUST00000157223 114 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm22383-201ENSMUST00000158188 327 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm17159-201ENSMUST00000169043 482 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm27254-201ENSMUST00000183926 517 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Mir6372-201ENSMUST00000185114 109 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm6012-201ENSMUST00000210821 730 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm46193-201ENSMUST00000219399 364 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.32□□□□□ -1.72
Rnf180Q3U827 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf180Q3U827 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm14001-201ENSMUST00000118847 247 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm12118-201ENSMUST00000119766 532 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm14578-201ENSMUST00000122166 391 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm15147-201ENSMUST00000122263 483 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm25284-201ENSMUST00000180345 141 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm26622-201ENSMUST00000180520 298 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm8242-202ENSMUST00000193056 475 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm44409-201ENSMUST00000198810 166 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm25203-202ENSMUST00000200458 216 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm44523-201ENSMUST00000205616 417 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm45513-201ENSMUST00000210228 376 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm45730-201ENSMUST00000212560 395 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm25203-201ENSMUST00000082842 215 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm22577-201ENSMUST00000083731 109 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Neat1-201ENSMUST00000173672 20771 ntBASIC4.31□□□□□ -1.72
Rnf180Q3U827 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf180Q3U827 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf180Q3U827 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf180Q3U827 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Rnf180Q3U827 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf180Q3U827 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Rnf180Q3U827 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf180Q3U827 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms