Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Mir6372-201ENSMUST00000185114 109 ntBASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Gm28924-201ENSMUST00000190012 241 ntBASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 AC154390.1-201ENSMUST00000225629 277 ntBASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ddb1Q3U1J4 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.28□□□□□ -1.73
Ddb1Q3U1J4 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm13761-201ENSMUST00000117238 807 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm14657-201ENSMUST00000117461 302 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm13711-201ENSMUST00000119708 453 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm24192-201ENSMUST00000157978 145 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm23152-201ENSMUST00000175322 116 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm24418-201ENSMUST00000177597 79 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm24639-201ENSMUST00000178518 79 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm23076-201ENSMUST00000179082 79 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm25077-201ENSMUST00000179157 79 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm23523-201ENSMUST00000180190 107 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm5368-201ENSMUST00000189012 589 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm43723-201ENSMUST00000196886 189 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm44320-201ENSMUST00000199276 86 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm34091-201ENSMUST00000200875 604 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm17990-201ENSMUST00000211728 553 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm23741-201ENSMUST00000097237 171 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.27□□□□□ -1.73
Ddb1Q3U1J4 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Mir759-201ENSMUST00000103254 98 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm13664-201ENSMUST00000117304 345 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm11693-201ENSMUST00000119625 565 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm12872-201ENSMUST00000121835 320 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm24666-201ENSMUST00000158937 167 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm21171-201ENSMUST00000180048 673 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm42526-201ENSMUST00000198956 393 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm32222-201ENSMUST00000203296 298 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm44256-201ENSMUST00000203304 335 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm46193-201ENSMUST00000219399 364 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm2436-201ENSMUST00000219562 774 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm22979-201ENSMUST00000082609 159 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.26□□□□□ -1.73
Ddb1Q3U1J4 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm23256-201ENSMUST00000102235 110 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm24835-201ENSMUST00000116777 111 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm381-201ENSMUST00000117443 2037 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm14537-201ENSMUST00000117464 599 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm11556-201ENSMUST00000120751 288 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm26255-201ENSMUST00000122492 103 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm25827-201ENSMUST00000157089 107 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm25624-201ENSMUST00000157222 275 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm17187-201ENSMUST00000164622 410 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Mir3470b-201ENSMUST00000175563 126 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm24757-201ENSMUST00000176987 371 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm28339-201ENSMUST00000185845 696 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm28057-201ENSMUST00000186603 615 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm28896-201ENSMUST00000188609 696 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm19498-201ENSMUST00000191128 331 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm38107-201ENSMUST00000194873 696 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms