Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Col28a1Q2UY11 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.37□□□□□ -1.87
Col28a1Q2UY11 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col28a1Q2UY11 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col28a1Q2UY11 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Col28a1Q2UY11 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.37□□□□□ -1.87
Col28a1Q2UY11 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm11936-201ENSMUST00000118323 160 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm14469-201ENSMUST00000118363 202 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm13419-201ENSMUST00000121711 271 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm6956-201ENSMUST00000134724 546 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm23326-201ENSMUST00000157419 105 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm22380-201ENSMUST00000157479 95 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm24504-201ENSMUST00000157679 100 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm23078-201ENSMUST00000157848 148 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm23592-201ENSMUST00000157859 117 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Mir1934-201ENSMUST00000158127 83 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm22108-201ENSMUST00000177961 106 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm24798-201ENSMUST00000179334 106 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm18486-201ENSMUST00000184040 298 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm27952-201ENSMUST00000184748 105 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Mir7062-201ENSMUST00000185038 66 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm5552-201ENSMUST00000197149 515 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm44609-201ENSMUST00000207157 460 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm7407-201ENSMUST00000208301 568 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm44853-201ENSMUST00000209070 250 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.36□□□□□ -1.87
Col28a1Q2UY11 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col28a1Q2UY11 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Mir673-201ENSMUST00000102361 91 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm24120-201ENSMUST00000103978 129 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm22590-201ENSMUST00000104247 128 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm13076-201ENSMUST00000118041 204 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm11388-201ENSMUST00000120908 159 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm22345-201ENSMUST00000122644 107 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm23411-201ENSMUST00000157988 62 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm25555-201ENSMUST00000158078 111 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm23581-201ENSMUST00000158531 63 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm25718-201ENSMUST00000158632 118 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm25535-201ENSMUST00000175364 125 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm22633-201ENSMUST00000179834 107 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm24518-201ENSMUST00000180275 94 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm2719-201ENSMUST00000191929 444 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm17966-201ENSMUST00000193453 594 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm43415-201ENSMUST00000201934 750 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm23848-201ENSMUST00000083826 106 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm25937-201ENSMUST00000083912 107 ntBASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col28a1Q2UY11 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm14566-201ENSMUST00000118915 321 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm13239-201ENSMUST00000119920 637 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm12276-201ENSMUST00000121709 301 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm15147-201ENSMUST00000122263 483 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms