Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm25314-201ENSMUST00000178810 79 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm19620-201ENSMUST00000195972 434 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm44403-201ENSMUST00000198554 129 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm34091-201ENSMUST00000200875 604 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm45063-201ENSMUST00000203726 472 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm45200-201ENSMUST00000207434 919 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm45317-201ENSMUST00000210385 223 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm23627-201ENSMUST00000082459 107 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm22502-201ENSMUST00000082488 107 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm24149-201ENSMUST00000082757 107 ntBASIC5.04□□□□□ -1.6
Col17a1Q07563 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Col17a1Q07563 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col17a1Q07563 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm11577-201ENSMUST00000118030 737 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm13170-201ENSMUST00000119716 643 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.03□□□□□ -1.6
Col17a1Q07563 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm24897-201ENSMUST00000179033 107 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm44859-201ENSMUST00000207831 94 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 AC171206.2-201ENSMUST00000215252 389 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm31849-201ENSMUST00000220306 375 ntBASIC5.03□□□□□ -1.6
Col17a1Q07563 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col17a1Q07563 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Col17a1Q07563 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Col17a1Q07563 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.03□□□□□ -1.6
Col17a1Q07563 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col17a1Q07563 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Gm14578-201ENSMUST00000122166 391 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.02□□□□□ -1.61
Col17a1Q07563 Gm23231-201ENSMUST00000157299 104 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Gm10105-201ENSMUST00000184601 270 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Gm5058-201ENSMUST00000187331 463 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Gm2979-201ENSMUST00000193442 463 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Gm2142-201ENSMUST00000197899 589 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 AC160134.1-201ENSMUST00000213450 551 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.02□□□□□ -1.61
Col17a1Q07563 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col17a1Q07563 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col17a1Q07563 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col17a1Q07563 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC5.02□□□□□ -1.61
Col17a1Q07563 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm14541-201ENSMUST00000118985 157 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Snora81-201ENSMUST00000157310 178 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm17062-201ENSMUST00000166987 461 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm45588-201ENSMUST00000211213 630 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.01□□□□□ -1.61
Col17a1Q07563 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm46389-201ENSMUST00000223199 392 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm24410-201ENSMUST00000083433 107 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 AC125374.3-201ENSMUST00000214983 2810 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col17a1Q07563 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col17a1Q07563 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.01□□□□□ -1.61
Col17a1Q07563 Gm43875-201ENSMUST00000203319 2475 ntBASIC5.01□□□□□ -1.61
Col17a1Q07563 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col17a1Q07563 Gm26247-201ENSMUST00000116702 91 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm14128-201ENSMUST00000119514 1011 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm23257-201ENSMUST00000158322 132 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm24053-201ENSMUST00000158620 105 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC5□□□□□ -1.61
Col17a1Q07563 Gm17538-201ENSMUST00000168236 327 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm24819-201ENSMUST00000175094 166 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col17a1Q07563 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5□□□□□ -1.61
Col17a1Q07563 Gm25873-201ENSMUST00000180317 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col17a1Q07563 Gm44063-201ENSMUST00000203307 376 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm45365-201ENSMUST00000209489 256 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col17a1Q07563 AC160984.2-201ENSMUST00000224927 791 ntBASIC5□□□□□ -1.61
Col17a1Q07563 CT010454.1-201ENSMUST00000225975 265 ntBASIC5□□□□□ -1.61
Col17a1Q07563 AC129017.1-201ENSMUST00000228363 270 ntBASIC5□□□□□ -1.61
Col17a1Q07563 AC170600.1-201ENSMUST00000228763 277 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Col17a1Q07563 Snord68-201ENSMUST00000082516 86 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm6361-201ENSMUST00000091031 435 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Col17a1Q07563 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col17a1Q07563 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Col17a1Q07563 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col17a1Q07563 AC153522.2-201ENSMUST00000218389 3853 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Col17a1Q07563 AC117199.1-201ENSMUST00000219940 3132 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col17a1Q07563 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms