Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm24870-201ENSMUST00000179897 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22288-201ENSMUST00000179904 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22645-201ENSMUST00000180010 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24565-201ENSMUST00000180099 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23805-201ENSMUST00000180129 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23512-201ENSMUST00000180237 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25327-201ENSMUST00000180263 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26058-201ENSMUST00000180294 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22418-201ENSMUST00000180326 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm19243-201ENSMUST00000198592 269 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm44294-201ENSMUST00000205090 728 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm44859-201ENSMUST00000207831 94 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm44938-201ENSMUST00000208614 427 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23629-201ENSMUST00000082465 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23924-201ENSMUST00000082474 108 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22246-201ENSMUST00000082478 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22747-201ENSMUST00000082495 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23296-201ENSMUST00000082555 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22063-201ENSMUST00000082560 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26129-201ENSMUST00000082719 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24859-201ENSMUST00000082729 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23057-201ENSMUST00000082801 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26328-201ENSMUST00000082821 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26331-201ENSMUST00000082824 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24205-201ENSMUST00000082953 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25405-201ENSMUST00000082973 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22628-201ENSMUST00000082988 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26324-201ENSMUST00000083073 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26496-201ENSMUST00000083150 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26127-201ENSMUST00000083193 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24456-201ENSMUST00000083198 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24458-201ENSMUST00000083204 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24018-201ENSMUST00000083232 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25794-201ENSMUST00000083286 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25790-201ENSMUST00000083293 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22295-201ENSMUST00000083311 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25127-201ENSMUST00000083336 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25583-201ENSMUST00000083413 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25577-201ENSMUST00000083414 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24414-201ENSMUST00000083434 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24861-201ENSMUST00000083459 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Mir215-201ENSMUST00000083628 112 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24803-201ENSMUST00000083693 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23103-201ENSMUST00000083725 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22580-201ENSMUST00000083727 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24260-201ENSMUST00000083741 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23732-201ENSMUST00000083751 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22682-201ENSMUST00000083854 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25869-201ENSMUST00000083855 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24693-201ENSMUST00000083885 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26317-201ENSMUST00000083894 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24448-201ENSMUST00000083979 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22798-201ENSMUST00000083992 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26427-201ENSMUST00000093648 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22886-201ENSMUST00000093714 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22170-201ENSMUST00000097247 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm13329-201ENSMUST00000117063 265 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm8666-201ENSMUST00000117517 292 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm16242-201ENSMUST00000117741 334 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm13903-201ENSMUST00000120945 193 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm23585-201ENSMUST00000157656 102 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm8242-202ENSMUST00000193056 475 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm44521-201ENSMUST00000206469 217 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm45403-201ENSMUST00000209453 276 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm45859-201ENSMUST00000212794 214 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm46194-201ENSMUST00000218136 320 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm23443-201ENSMUST00000082916 128 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Gm26066-201ENSMUST00000083385 109 ntBASIC4.59□□□□□ -1.67
Col6a1Q04857 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
Col6a1Q04857 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.59□□□□□ -1.68
Col6a1Q04857 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Col6a1Q04857 Neat1-201ENSMUST00000173672 20771 ntBASIC4.59□□□□□ -1.68
Col6a1Q04857 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Col6a1Q04857 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Col6a1Q04857 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.59□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms