Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col8a1Q00780 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
Col8a1Q00780 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col8a1Q00780 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col8a1Q00780 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm25538-201ENSMUST00000101943 107 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Mir592-201ENSMUST00000102113 96 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm14657-201ENSMUST00000117461 302 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm5379-201ENSMUST00000120973 826 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm4916-201ENSMUST00000126139 642 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm3851-201ENSMUST00000168653 318 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm27470-201ENSMUST00000184070 210 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm27189-201ENSMUST00000184119 190 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm27465-201ENSMUST00000184290 91 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm29330-201ENSMUST00000190032 699 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm19123-201ENSMUST00000190716 651 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm37997-201ENSMUST00000193515 267 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Mir7661-201ENSMUST00000197023 61 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Mir3535-201ENSMUST00000197651 147 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm44391-201ENSMUST00000198490 93 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm25203-202ENSMUST00000200458 216 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm29774-201ENSMUST00000219270 436 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.64□□□□□ -1.83
Col8a1Q00780 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm23925-201ENSMUST00000082471 132 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm25203-201ENSMUST00000082842 215 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col8a1Q00780 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col8a1Q00780 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.64□□□□□ -1.83
Col8a1Q00780 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col8a1Q00780 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm24281-201ENSMUST00000104234 136 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm15151-201ENSMUST00000117106 177 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm12173-201ENSMUST00000117622 273 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm6574-201ENSMUST00000120037 362 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm15037-201ENSMUST00000120358 259 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm5391-201ENSMUST00000121155 613 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm14581-201ENSMUST00000121726 198 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm26479-201ENSMUST00000122620 106 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm23960-201ENSMUST00000157206 131 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm25071-201ENSMUST00000175232 70 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm21991-201ENSMUST00000180006 508 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm26701-201ENSMUST00000181571 234 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm37050-201ENSMUST00000193464 466 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm7468-201ENSMUST00000203900 652 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm43188-201ENSMUST00000200180 2160 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col8a1Q00780 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col8a1Q00780 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col8a1Q00780 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.63□□□□□ -1.83
Col8a1Q00780 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm23577-201ENSMUST00000103950 110 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm22115-201ENSMUST00000103976 133 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm23923-201ENSMUST00000104108 133 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm24482-201ENSMUST00000117005 93 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm6897-201ENSMUST00000117714 138 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm14758-201ENSMUST00000119104 138 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm15244-201ENSMUST00000121122 130 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 301.3 ms