Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Tpm1P58771 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.24□□□□□ -2.05
Tpm1P58771 Gm25939-201ENSMUST00000179876 191 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.24□□□□□ -2.05
Tpm1P58771 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.24□□□□□ -2.05
Tpm1P58771 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.24□□□□□ -2.05
Tpm1P58771 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.24□□□□□ -2.05
Tpm1P58771 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.24□□□□□ -2.05
Tpm1P58771 Mir6995-201ENSMUST00000183658 71 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Mir6950-201ENSMUST00000184438 73 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm28900-201ENSMUST00000185232 156 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm28627-201ENSMUST00000186141 453 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm28356-202ENSMUST00000187566 858 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm20885-201ENSMUST00000190192 654 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Tpm1P58771 Gm33571-201ENSMUST00000193271 657 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm36866-201ENSMUST00000193343 657 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm36047-201ENSMUST00000193659 657 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm20857-201ENSMUST00000194766 657 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm20858-201ENSMUST00000195459 657 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm30638-201ENSMUST00000195570 656 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm44393-201ENSMUST00000197418 138 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.24□□□□□ -2.05
Tpm1P58771 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Tpm1P58771 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm23444-201ENSMUST00000082922 191 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Tpm1P58771 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.24□□□□□ -2.05
Tpm1P58771 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Gm13343-201ENSMUST00000116474 105 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Gm14670-201ENSMUST00000117327 337 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.23□□□□□ -2.05
Tpm1P58771 Gm22159-201ENSMUST00000158412 130 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Tpm1P58771 Gm17072-201ENSMUST00000166673 658 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Gm27532-201ENSMUST00000183726 113 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Mir7k-201ENSMUST00000184115 110 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.23□□□□□ -2.05
Tpm1P58771 Platr25-208ENSMUST00000222602 939 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Gm25403-201ENSMUST00000082971 143 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Gm23727-201ENSMUST00000083352 164 ntBASIC2.23□□□□□ -2.05
Tpm1P58771 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.22□□□□□ -2.05
Tpm1P58771 Gm2348-201ENSMUST00000108782 300 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Tpm1P58771 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm11935-201ENSMUST00000118608 399 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm14848-201ENSMUST00000121850 467 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm25047-201ENSMUST00000122667 104 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.22□□□□□ -2.05
Tpm1P58771 Gm16355-201ENSMUST00000128606 231 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Tpm1P58771 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm29288-201ENSMUST00000191582 901 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm37987-201ENSMUST00000194999 825 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.22□□□□□ -2.05
Tpm1P58771 Gm43286-201ENSMUST00000197420 424 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Tpm1P58771 Gm6796-201ENSMUST00000211919 243 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm18729-201ENSMUST00000217230 621 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Tpm1P58771 Gm26055-201ENSMUST00000083038 107 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm23650-201ENSMUST00000083355 70 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.22□□□□□ -2.05
Tpm1P58771 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Tpm1P58771 Gm26256-201ENSMUST00000122499 186 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.21□□□□□ -2.06
Tpm1P58771 Gm25621-201ENSMUST00000157223 114 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Gm24010-201ENSMUST00000157731 282 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Tpm1P58771 Gm20415-201ENSMUST00000172877 423 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Mir6379-201ENSMUST00000183392 115 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Tpm1P58771 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Tpm1P58771 Gm18667-201ENSMUST00000186523 484 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.21□□□□□ -2.06
Tpm1P58771 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.21□□□□□ -2.06
Tpm1P58771 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.21□□□□□ -2.06
Tpm1P58771 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Tpm1P58771 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Tpm1P58771 Gm25799-201ENSMUST00000082643 107 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Tpm1P58771 Mir127-201ENSMUST00000093568 70 ntBASIC2.21□□□□□ -2.06
Tpm1P58771 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Tpm1P58771 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms