Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.11□□□□□ -1.91
NcanP55066 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.11□□□□□ -1.91
NcanP55066 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
NcanP55066 Gm25500-201ENSMUST00000104426 123 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm22771-201ENSMUST00000104449 91 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm3940-201ENSMUST00000105087 432 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm14359-201ENSMUST00000118883 424 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm15244-201ENSMUST00000121122 130 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm15147-201ENSMUST00000122263 483 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm25784-201ENSMUST00000122524 81 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm9498-201ENSMUST00000140849 291 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.11□□□□□ -1.91
NcanP55066 Gm24211-201ENSMUST00000158264 107 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm23583-201ENSMUST00000158533 289 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm26004-201ENSMUST00000158804 116 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.11□□□□□ -1.91
NcanP55066 Gm18486-201ENSMUST00000184040 298 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm36984-201ENSMUST00000192770 235 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm38044-201ENSMUST00000192964 487 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.11□□□□□ -1.91
NcanP55066 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NcanP55066 Gm43224-201ENSMUST00000201567 898 ntBASIC3.11□□□□□ -1.91
NcanP55066 Gm45023-201ENSMUST00000207951 379 ntBASIC3.11□□□□□ -1.91
NcanP55066 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
NcanP55066 CT025603.4-201ENSMUST00000225777 413 ntBASIC3.11□□□□□ -1.91
NcanP55066 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NcanP55066 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NcanP55066 Gm37598-201ENSMUST00000194506 1301 ntBASIC3.11□□□□□ -1.91
NcanP55066 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NcanP55066 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NcanP55066 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.1□□□□□ -1.91
NcanP55066 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.1□□□□□ -1.91
NcanP55066 Gm26015-201ENSMUST00000104402 125 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm14537-201ENSMUST00000117464 599 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm11845-201ENSMUST00000117886 327 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm12770-201ENSMUST00000121734 462 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm25294-201ENSMUST00000122791 104 ntBASIC3.1□□□□□ -1.91
NcanP55066 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NcanP55066 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
NcanP55066 Gm23714-201ENSMUST00000179259 105 ntBASIC3.1□□□□□ -1.91
NcanP55066 Mir8096-201ENSMUST00000184526 127 ntBASIC3.1□□□□□ -1.91
NcanP55066 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC3.1□□□□□ -1.91
NcanP55066 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NcanP55066 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.1□□□□□ -1.91
NcanP55066 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.1□□□□□ -1.91
NcanP55066 Gm18703-201ENSMUST00000215318 333 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm3442-201ENSMUST00000216808 710 ntBASIC3.1□□□□□ -1.91
NcanP55066 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NcanP55066 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.1□□□□□ -1.91
NcanP55066 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.1□□□□□ -1.91
NcanP55066 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.1□□□□□ -1.91
NcanP55066 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.1□□□□□ -1.91
NcanP55066 Gm9818-201ENSMUST00000050900 255 ntBASIC3.1□□□□□ -1.91
NcanP55066 Mir19a-201ENSMUST00000083482 82 ntBASIC3.1□□□□□ -1.91
NcanP55066 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NcanP55066 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.09□□□□□ -1.91
NcanP55066 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NcanP55066 Gm9850-201ENSMUST00000117916 227 ntBASIC3.09□□□□□ -1.91
NcanP55066 Gm14785-201ENSMUST00000120185 539 ntBASIC3.09□□□□□ -1.91
NcanP55066 Gm13433-201ENSMUST00000121701 240 ntBASIC3.09□□□□□ -1.91
NcanP55066 Gm8880-201ENSMUST00000121800 454 ntBASIC3.09□□□□□ -1.91
NcanP55066 Gm13602-201ENSMUST00000122405 493 ntBASIC3.09□□□□□ -1.91
NcanP55066 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.09□□□□□ -1.91
NcanP55066 Gm23234-201ENSMUST00000157304 134 ntBASIC3.09□□□□□ -1.91
NcanP55066 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NcanP55066 Gm23379-201ENSMUST00000180026 107 ntBASIC3.09□□□□□ -1.91
NcanP55066 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC3.09□□□□□ -1.91
NcanP55066 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.09□□□□□ -1.91
NcanP55066 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NcanP55066 Trbv22-201ENSMUST00000191697 291 ntBASIC3.09□□□□□ -1.91
NcanP55066 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NcanP55066 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.09□□□□□ -1.91
NcanP55066 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.09□□□□□ -1.91
NcanP55066 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.09□□□□□ -1.91
NcanP55066 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.09□□□□□ -1.91
NcanP55066 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.09□□□□□ -1.91
NcanP55066 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NcanP55066 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NcanP55066 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NcanP55066 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.09□□□□□ -1.92
NcanP55066 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NcanP55066 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NcanP55066 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.09□□□□□ -1.92
NcanP55066 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.08□□□□□ -1.92
NcanP55066 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
NcanP55066 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.08□□□□□ -1.92
NcanP55066 Gm15183-201ENSMUST00000118933 348 ntBASIC3.08□□□□□ -1.92
NcanP55066 Gm25044-201ENSMUST00000158603 104 ntBASIC3.08□□□□□ -1.92
NcanP55066 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.08□□□□□ -1.92
NcanP55066 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.08□□□□□ -1.92
NcanP55066 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.08□□□□□ -1.92
NcanP55066 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.08□□□□□ -1.92
NcanP55066 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.08□□□□□ -1.92
NcanP55066 Gm45366-201ENSMUST00000209828 384 ntBASIC3.08□□□□□ -1.92
NcanP55066 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.08□□□□□ -1.92
NcanP55066 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.08□□□□□ -1.92
NcanP55066 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.08□□□□□ -1.92
NcanP55066 Gm18015-201ENSMUST00000214879 316 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 130.3 ms