Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm3111-201ENSMUST00000167426 490 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm17183-201ENSMUST00000171170 493 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm22858-201ENSMUST00000174972 76 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm28489-201ENSMUST00000186655 316 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm37550-201ENSMUST00000193230 463 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm43070-201ENSMUST00000196938 415 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm3010-201ENSMUST00000198805 448 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Col2a1P28481 Gm45063-201ENSMUST00000203726 472 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Col2a1P28481 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col2a1P28481 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.02
Col2a1P28481 Gm23516-201ENSMUST00000093728 107 ntBASIC2.4□□□□□ -2.02
Col2a1P28481 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col2a1P28481 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Col2a1P28481 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Col2a1P28481 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Col2a1P28481 Mir208b-201ENSMUST00000104735 77 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm15108-201ENSMUST00000116160 803 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm15148-201ENSMUST00000117602 156 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm7429-201ENSMUST00000118664 348 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm15760-201ENSMUST00000119553 283 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm12294-201ENSMUST00000119723 490 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm22960-201ENSMUST00000122517 104 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm11392-201ENSMUST00000181419 710 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm27845-201ENSMUST00000184479 114 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm17929-201ENSMUST00000186851 627 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm44348-201ENSMUST00000200165 122 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm44533-201ENSMUST00000207782 268 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm17991-201ENSMUST00000208139 297 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm45742-201ENSMUST00000212400 433 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm24921-201ENSMUST00000083024 107 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Mir222-201ENSMUST00000083537 79 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Col2a1P28481 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm12814-201ENSMUST00000117091 846 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm15162-201ENSMUST00000119325 283 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm16331-201ENSMUST00000144274 498 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm22727-201ENSMUST00000158090 116 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm15900-201ENSMUST00000161584 342 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm16588-201ENSMUST00000162889 355 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm17153-201ENSMUST00000171314 490 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm7438-201ENSMUST00000177664 639 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm7408-201ENSMUST00000178014 639 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm7386-201ENSMUST00000178020 639 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm3657-201ENSMUST00000178170 639 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm7415-201ENSMUST00000178205 639 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm7391-201ENSMUST00000178680 639 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm27676-201ENSMUST00000183669 61 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm29550-201ENSMUST00000185543 285 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm18775-201ENSMUST00000190763 586 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm31230-201ENSMUST00000199725 785 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm43198-201ENSMUST00000200927 326 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm43901-201ENSMUST00000203247 453 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm45530-201ENSMUST00000211658 225 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Gm35262-201ENSMUST00000215133 267 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.39□□□□□ -2.03
Col2a1P28481 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm22978-201ENSMUST00000082607 160 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col2a1P28481 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.39□□□□□ -2.03
Col2a1P28481 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm25068-201ENSMUST00000103895 110 ntBASIC2.38□□□□□ -2.03
Col2a1P28481 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm16431-201ENSMUST00000117454 431 ntBASIC2.38□□□□□ -2.03
Col2a1P28481 Gm11268-201ENSMUST00000118347 267 ntBASIC2.38□□□□□ -2.03
Col2a1P28481 Gm6591-201ENSMUST00000121063 434 ntBASIC2.38□□□□□ -2.03
Col2a1P28481 Gm14577-201ENSMUST00000121134 256 ntBASIC2.38□□□□□ -2.03
Col2a1P28481 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.38□□□□□ -2.03
Col2a1P28481 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.38□□□□□ -2.03
Col2a1P28481 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.38□□□□□ -2.03
Col2a1P28481 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col2a1P28481 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms