Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.31□□□□□ -2.04
P20040 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.31□□□□□ -2.04
P20040 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
P20040 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
P20040 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
P20040 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
P20040 Gm22061-201ENSMUST00000082557 107 ntBASIC2.31□□□□□ -2.04
P20040 Gm26206-201ENSMUST00000082908 110 ntBASIC2.31□□□□□ -2.04
P20040 Gm25199-201ENSMUST00000083095 104 ntBASIC2.31□□□□□ -2.04
P20040 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
P20040 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.31□□□□□ -2.04
P20040 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.31□□□□□ -2.04
P20040 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
P20040 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
P20040 Gm24126-201ENSMUST00000104111 106 ntBASIC2.3□□□□□ -2.04
P20040 Gm14007-201ENSMUST00000118288 210 ntBASIC2.3□□□□□ -2.04
P20040 Gm14843-201ENSMUST00000119596 212 ntBASIC2.3□□□□□ -2.04
P20040 Gm11438-201ENSMUST00000121582 189 ntBASIC2.3□□□□□ -2.04
P20040 Gm15986-201ENSMUST00000122153 400 ntBASIC2.3□□□□□ -2.04
P20040 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.3□□□□□ -2.04
P20040 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
P20040 Gm24475-201ENSMUST00000157435 143 ntBASIC2.3□□□□□ -2.04
P20040 Gm24691-201ENSMUST00000157762 140 ntBASIC2.3□□□□□ -2.04
P20040 Gm23223-201ENSMUST00000158119 127 ntBASIC2.3□□□□□ -2.04
P20040 Gm24681-201ENSMUST00000158760 107 ntBASIC2.3□□□□□ -2.04
P20040 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
P20040 Gm25156-201ENSMUST00000179809 79 ntBASIC2.3□□□□□ -2.04
P20040 Mir6363-201ENSMUST00000184880 114 ntBASIC2.3□□□□□ -2.04
P20040 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.3□□□□□ -2.04
P20040 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
P20040 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.3□□□□□ -2.04
P20040 Gm43669-201ENSMUST00000198229 436 ntBASIC2.3□□□□□ -2.04
P20040 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
P20040 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.3□□□□□ -2.04
P20040 Gm2436-201ENSMUST00000219562 774 ntBASIC2.3□□□□□ -2.04
P20040 Gm32300-201ENSMUST00000221735 515 ntBASIC2.3□□□□□ -2.04
P20040 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
P20040 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.3□□□□□ -2.04
P20040 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.3□□□□□ -2.04
P20040 Gm24948-201ENSMUST00000082866 207 ntBASIC2.3□□□□□ -2.04
P20040 Gm22974-201ENSMUST00000083301 103 ntBASIC2.3□□□□□ -2.04
P20040 Gm5670-201ENSMUST00000093546 372 ntBASIC2.3□□□□□ -2.04
P20040 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.3□□□□□ -2.04
P20040 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
P20040 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
P20040 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.29□□□□□ -2.04
P20040 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
P20040 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
P20040 Gm11357-201ENSMUST00000119758 954 ntBASIC2.29□□□□□ -2.04
P20040 Gm17377-201ENSMUST00000165184 207 ntBASIC2.29□□□□□ -2.04
P20040 Gm17065-201ENSMUST00000165245 239 ntBASIC2.29□□□□□ -2.04
P20040 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.29□□□□□ -2.04
P20040 Gm2930-201ENSMUST00000170403 474 ntBASIC2.29□□□□□ -2.04
P20040 Gm27659-201ENSMUST00000183472 98 ntBASIC2.29□□□□□ -2.04
P20040 Gm28283-201ENSMUST00000185509 178 ntBASIC2.29□□□□□ -2.04
P20040 Gm18692-201ENSMUST00000193047 511 ntBASIC2.29□□□□□ -2.04
P20040 Gm38154-201ENSMUST00000195444 340 ntBASIC2.29□□□□□ -2.04
P20040 Gm19089-201ENSMUST00000197207 613 ntBASIC2.29□□□□□ -2.04
P20040 Gm43114-201ENSMUST00000198298 343 ntBASIC2.29□□□□□ -2.04
P20040 Gm6615-201ENSMUST00000199426 631 ntBASIC2.29□□□□□ -2.04
P20040 Gm15235-201ENSMUST00000200572 194 ntBASIC2.29□□□□□ -2.04
P20040 Gm29817-201ENSMUST00000210098 172 ntBASIC2.29□□□□□ -2.04
P20040 Gm45522-201ENSMUST00000210784 166 ntBASIC2.29□□□□□ -2.04
P20040 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.29□□□□□ -2.04
P20040 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.29□□□□□ -2.04
P20040 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.29□□□□□ -2.04
P20040 Gm19326-201ENSMUST00000219818 326 ntBASIC2.29□□□□□ -2.04
P20040 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.29□□□□□ -2.04
P20040 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.29□□□□□ -2.04
P20040 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.29□□□□□ -2.04
P20040 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.29□□□□□ -2.04
P20040 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.29□□□□□ -2.04
P20040 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.29□□□□□ -2.04
P20040 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.29□□□□□ -2.04
P20040 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
P20040 Gm24921-201ENSMUST00000083024 107 ntBASIC2.29□□□□□ -2.04
P20040 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.29□□□□□ -2.04
P20040 Gm23741-201ENSMUST00000097237 171 ntBASIC2.29□□□□□ -2.04
P20040 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.29□□□□□ -2.04
P20040 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
P20040 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
P20040 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.28□□□□□ -2.04
P20040 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
P20040 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
P20040 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
P20040 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
P20040 Gm24430-201ENSMUST00000104077 104 ntBASIC2.28□□□□□ -2.04
P20040 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
P20040 Gm14602-201ENSMUST00000118625 340 ntBASIC2.28□□□□□ -2.04
P20040 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.28□□□□□ -2.04
P20040 Gm25153-201ENSMUST00000157118 156 ntBASIC2.28□□□□□ -2.04
P20040 Gm22098-201ENSMUST00000157930 85 ntBASIC2.28□□□□□ -2.04
P20040 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.28□□□□□ -2.04
P20040 Gm25451-201ENSMUST00000177832 121 ntBASIC2.28□□□□□ -2.04
P20040 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.28□□□□□ -2.04
P20040 Gm23190-201ENSMUST00000180307 64 ntBASIC2.28□□□□□ -2.04
P20040 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.28□□□□□ -2.04
P20040 Gm29516-201ENSMUST00000190402 468 ntBASIC2.28□□□□□ -2.04
P20040 Gm37946-201ENSMUST00000192064 347 ntBASIC2.28□□□□□ -2.04
P20040 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms