Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm43026-201ENSMUST00000202972 325 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm44256-201ENSMUST00000203304 335 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.15□□□□□ -2.07
Cdx1P18111 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm2544-201ENSMUST00000222702 756 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Cdx1P18111 Gm23264-201ENSMUST00000083372 107 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Cdx1P18111 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Cdx1P18111 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Cdx1P18111 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Cdx1P18111 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm23911-201ENSMUST00000104596 134 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Mir467h-201ENSMUST00000116759 121 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm11219-201ENSMUST00000118565 358 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm8217-201ENSMUST00000119136 465 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm12787-201ENSMUST00000119234 396 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm12935-201ENSMUST00000119352 246 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm12096-201ENSMUST00000121149 829 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Cdx1P18111 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.14□□□□□ -2.07
Cdx1P18111 Gm22037-201ENSMUST00000157280 296 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm24908-201ENSMUST00000157294 127 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm22849-201ENSMUST00000157713 307 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm23223-201ENSMUST00000158119 127 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Mir1927-201ENSMUST00000158579 109 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.14□□□□□ -2.07
Cdx1P18111 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm24264-201ENSMUST00000179835 94 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cdx1P18111 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Cdx1P18111 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cdx1P18111 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Cdx1P18111 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.14□□□□□ -2.07
Cdx1P18111 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Cdx1P18111 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cdx1P18111 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm22750-201ENSMUST00000102076 103 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm24049-201ENSMUST00000102409 100 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm14599-201ENSMUST00000120469 474 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm26256-201ENSMUST00000122499 186 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm20718-201ENSMUST00000176058 259 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
Cdx1P18111 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm44524-201ENSMUST00000203899 271 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm44459-201ENSMUST00000203926 160 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.13□□□□□ -2.07
Cdx1P18111 Gm44818-201ENSMUST00000206608 358 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.13□□□□□ -2.07
Cdx1P18111 Gm19140-201ENSMUST00000209790 421 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Cdx1P18111 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Cdx1P18111 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Cdx1P18111 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Gm24446-201ENSMUST00000083982 156 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.13□□□□□ -2.07
Cdx1P18111 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Cdx1P18111 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Mir344c-201ENSMUST00000103919 92 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm22674-201ENSMUST00000104413 131 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm12814-201ENSMUST00000117091 846 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm2003-201ENSMUST00000118537 636 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm22947-201ENSMUST00000158559 91 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm15900-201ENSMUST00000161584 342 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.12□□□□□ -2.07
Cdx1P18111 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Cdx1P18111 Gm28627-201ENSMUST00000186141 453 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm44320-201ENSMUST00000199276 86 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Gm43171-201ENSMUST00000199882 291 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Cdx1P18111 Gm19709-201ENSMUST00000215403 482 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.12□□□□□ -2.07
Cdx1P18111 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Cdx1P18111 Gm24948-201ENSMUST00000082866 207 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Cdx1P18111 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
Cdx1P18111 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.12□□□□□ -2.07
Cdx1P18111 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Cdx1P18111 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Cdx1P18111 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cdx1P18111 Gm14670-201ENSMUST00000117327 337 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms