Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.85□□□□□ -1.95
Lire1P11260 Gm43007-201ENSMUST00000197618 291 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.85□□□□□ -1.95
Lire1P11260 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.85□□□□□ -1.95
Lire1P11260 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.85□□□□□ -1.95
Lire1P11260 Gm30534-201ENSMUST00000217928 207 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm9973-202ENSMUST00000220926 166 ntBASIC2.85□□□□□ -1.95
Lire1P11260 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.85□□□□□ -1.95
Lire1P11260 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.85□□□□□ -1.95
Lire1P11260 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.85□□□□□ -1.95
Lire1P11260 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm5670-201ENSMUST00000093546 372 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Lire1P11260 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Lire1P11260 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Lire1P11260 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Lire1P11260 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Lire1P11260 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Lire1P11260 Gm22936-201ENSMUST00000103955 126 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm26423-201ENSMUST00000104277 128 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm13876-201ENSMUST00000118451 261 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Lire1P11260 Gm11321-201ENSMUST00000121257 902 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.84□□□□□ -1.95
Lire1P11260 Gm24787-201ENSMUST00000157380 123 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm22554-201ENSMUST00000157798 147 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm17054-201ENSMUST00000169811 259 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.95
Lire1P11260 Mir3092-201ENSMUST00000174954 96 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Mir7667-201ENSMUST00000183866 63 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm28000-201ENSMUST00000184380 85 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm28825-201ENSMUST00000186233 238 ntBASIC2.84□□□□□ -1.95
Lire1P11260 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.84□□□□□ -1.95
Lire1P11260 Gm22247-201ENSMUST00000082476 131 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Gm22866-201ENSMUST00000083947 177 ntBASIC2.84□□□□□ -1.95
Lire1P11260 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Lire1P11260 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Lire1P11260 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.84□□□□□ -1.96
Lire1P11260 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.84□□□□□ -1.96
Lire1P11260 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Lire1P11260 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Lire1P11260 Gm26154-201ENSMUST00000102339 96 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Lire1P11260 Gm24736-201ENSMUST00000158862 130 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Gm17377-201ENSMUST00000165184 207 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Gm17062-201ENSMUST00000166987 461 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Lire1P11260 Gm4076-201ENSMUST00000179230 965 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Gm38154-201ENSMUST00000195444 340 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.83□□□□□ -1.96
Lire1P11260 Gm45513-201ENSMUST00000210228 376 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.83□□□□□ -1.96
Lire1P11260 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.83□□□□□ -1.96
Lire1P11260 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.83□□□□□ -1.96
Lire1P11260 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.83□□□□□ -1.96
Lire1P11260 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.83□□□□□ -1.96
Lire1P11260 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Lire1P11260 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Lire1P11260 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Lire1P11260 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Snord14c-201ENSMUST00000101927 86 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm11065-201ENSMUST00000111462 228 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm12793-201ENSMUST00000119268 292 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm22098-201ENSMUST00000157930 85 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm24190-201ENSMUST00000157976 216 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm22527-201ENSMUST00000158816 106 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm26297-201ENSMUST00000179464 132 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm24137-201ENSMUST00000180055 79 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm22391-201ENSMUST00000180356 79 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.82□□□□□ -1.96
Lire1P11260 Gm25203-202ENSMUST00000200458 216 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm42739-201ENSMUST00000200687 226 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm45522-201ENSMUST00000210784 166 ntBASIC2.82□□□□□ -1.96
Lire1P11260 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.82□□□□□ -1.96
Lire1P11260 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.82□□□□□ -1.96
Lire1P11260 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Lire1P11260 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.82□□□□□ -1.96
Lire1P11260 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.82□□□□□ -1.96
Lire1P11260 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.82□□□□□ -1.96
Lire1P11260 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Lire1P11260 Gm25203-201ENSMUST00000082842 215 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Mir19a-201ENSMUST00000083482 82 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Gm22154-201ENSMUST00000083844 131 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.82□□□□□ -1.96
Lire1P11260 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.82□□□□□ -1.96
Lire1P11260 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Lire1P11260 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Lire1P11260 Gm13761-201ENSMUST00000117238 807 ntBASIC2.81□□□□□ -1.96
Lire1P11260 Gm12071-201ENSMUST00000121968 469 ntBASIC2.81□□□□□ -1.96
Lire1P11260 Gm16533-201ENSMUST00000140035 228 ntBASIC2.81□□□□□ -1.96
Lire1P11260 Gm26214-201ENSMUST00000158581 107 ntBASIC2.81□□□□□ -1.96
Lire1P11260 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.81□□□□□ -1.96
Lire1P11260 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms