Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.63□□□□□ -2.15
Col1a1P11087 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.63□□□□□ -2.15
Col1a1P11087 Gm26029-201ENSMUST00000158659 132 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm23476-201ENSMUST00000158881 274 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm28647-201ENSMUST00000188416 197 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC1.63□□□□□ -2.15
Col1a1P11087 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 AC115878.1-201ENSMUST00000227247 334 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm24951-201ENSMUST00000102182 109 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Gm14577-201ENSMUST00000121134 256 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Gm11797-201ENSMUST00000121336 754 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Col1a1P11087 Gm22565-201ENSMUST00000175540 69 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Mir6995-201ENSMUST00000183658 71 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.62□□□□□ -2.15
Col1a1P11087 Gm37219-201ENSMUST00000192036 926 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Gm42834-201ENSMUST00000196845 256 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 AC132104.1-201ENSMUST00000213615 260 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 AC154851.2-201ENSMUST00000222172 644 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Col1a1P11087 Gm25199-201ENSMUST00000083095 104 ntBASIC1.62□□□□□ -2.15
Col1a1P11087 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col1a1P11087 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col1a1P11087 Gm25787-201ENSMUST00000104709 92 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col1a1P11087 Gm14591-201ENSMUST00000120407 518 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm14069-201ENSMUST00000120815 229 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm14694-201ENSMUST00000121856 282 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm13676-201ENSMUST00000122185 591 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm25339-201ENSMUST00000157458 232 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm22386-201ENSMUST00000158192 129 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.61□□□□□ -2.15
Col1a1P11087 Gm38281-201ENSMUST00000192301 315 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm35570-201ENSMUST00000198730 681 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 Gm43124-201ENSMUST00000201878 278 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.61□□□□□ -2.15
Col1a1P11087 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Col1a1P11087 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.61□□□□□ -2.15
Col1a1P11087 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Col1a1P11087 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
Col1a1P11087 Gm6429-201ENSMUST00000117144 475 ntBASIC1.6□□□□□ -2.15
Col1a1P11087 Gm11352-201ENSMUST00000119264 517 ntBASIC1.6□□□□□ -2.15
Col1a1P11087 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Col1a1P11087 Gm6059-201ENSMUST00000196903 340 ntBASIC1.6□□□□□ -2.15
Col1a1P11087 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.6□□□□□ -2.15
Col1a1P11087 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.6□□□□□ -2.15
Col1a1P11087 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.6□□□□□ -2.15
Col1a1P11087 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Col1a1P11087 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.6□□□□□ -2.15
Col1a1P11087 Gm22829-201ENSMUST00000083771 106 ntBASIC1.6□□□□□ -2.15
Col1a1P11087 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col1a1P11087 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col1a1P11087 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Col1a1P11087 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Col1a1P11087 Gm14815-201ENSMUST00000120060 488 ntBASIC1.59□□□□□ -2.15
Col1a1P11087 Gm23328-201ENSMUST00000157418 132 ntBASIC1.59□□□□□ -2.15
Col1a1P11087 Gm25161-201ENSMUST00000158913 132 ntBASIC1.59□□□□□ -2.15
Col1a1P11087 Gm44520-201ENSMUST00000205447 802 ntBASIC1.59□□□□□ -2.15
Col1a1P11087 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.59□□□□□ -2.15
Col1a1P11087 Gm19540-201ENSMUST00000221843 810 ntBASIC1.59□□□□□ -2.15
Col1a1P11087 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.59□□□□□ -2.15
Col1a1P11087 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC1.59□□□□□ -2.15
Col1a1P11087 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.59□□□□□ -2.16
Col1a1P11087 Gm26154-201ENSMUST00000102339 96 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Gm12137-201ENSMUST00000119565 346 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Gm5646-201ENSMUST00000120568 714 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Gm8502-201ENSMUST00000185708 901 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Col1a1P11087 AC125531.1-201ENSMUST00000219849 221 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Col1a1P11087 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Col1a1P11087 Gm16261-201ENSMUST00000096813 205 ntBASIC1.58□□□□□ -2.16
Col1a1P11087 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Gm14940-201ENSMUST00000119309 495 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Gm12238-201ENSMUST00000127764 124 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Gm23441-201ENSMUST00000157268 127 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Gm17064-201ENSMUST00000167690 452 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Gm44548-201ENSMUST00000208929 192 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC1.57□□□□□ -2.16
Col1a1P11087 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Col1a1P11087 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
Col1a1P11087 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.57□□□□□ -2.16
Col1a1P11087 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Col1a1P11087 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Col1a1P11087 Gm25107-201ENSMUST00000122472 129 ntBASIC1.56□□□□□ -2.16
Col1a1P11087 Mir5099-201ENSMUST00000175257 74 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms