Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 CT025525.4-201ENSMUST00000227728 277 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Hoxd3P09027 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Hoxd3P09027 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd3P09027 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd3P09027 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
Hoxd3P09027 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm23320-201ENSMUST00000104462 127 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm14086-201ENSMUST00000117152 173 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm26049-201ENSMUST00000157313 108 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm25393-201ENSMUST00000157336 285 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm22870-201ENSMUST00000157501 112 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm26310-201ENSMUST00000157766 117 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm26312-201ENSMUST00000157769 165 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm20674-201ENSMUST00000177452 369 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Trbv6-201ENSMUST00000193743 276 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm9442-201ENSMUST00000194242 319 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm43602-201ENSMUST00000196772 300 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm5876-201ENSMUST00000203735 243 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm32536-201ENSMUST00000205209 445 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC3.89□□□□□ -1.79
Hoxd3P09027 AC241593.2-201ENSMUST00000225099 510 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm22620-201ENSMUST00000082700 133 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm26330-201ENSMUST00000082817 104 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Snord59a-201ENSMUST00000082844 74 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd3P09027 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd3P09027 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.89□□□□□ -1.79
Hoxd3P09027 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
Hoxd3P09027 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd3P09027 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd3P09027 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd3P09027 Dbpht2-202ENSMUST00000221311 5341 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm43283-201ENSMUST00000199138 2548 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm36931-201ENSMUST00000192997 4801 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm25595-201ENSMUST00000102273 97 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm13922-201ENSMUST00000119505 156 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm13213-201ENSMUST00000119668 474 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm12854-201ENSMUST00000128518 297 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm25907-201ENSMUST00000158486 125 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Mir6418-201ENSMUST00000185075 115 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm18177-201ENSMUST00000188373 404 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 AL645522.1-201ENSMUST00000197692 104 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm7665-201ENSMUST00000076710 297 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm26166-201ENSMUST00000083788 107 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Hoxd3P09027 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Hoxd3P09027 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 492.5 ms