Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm14771-201ENSMUST00000118249 203 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 Gm6664-201ENSMUST00000119138 468 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Col5a1O88207 Gm24517-201ENSMUST00000122560 107 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 Gm27845-201ENSMUST00000184479 114 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.88□□□□□ -2.11
Col5a1O88207 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.88□□□□□ -2.11
Col5a1O88207 Gm42805-201ENSMUST00000196158 276 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 Gm44349-201ENSMUST00000197048 123 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.88□□□□□ -2.11
Col5a1O88207 Gm43198-201ENSMUST00000200927 326 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC1.88□□□□□ -2.11
Col5a1O88207 Gm7675-201ENSMUST00000208828 686 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 Gm45530-201ENSMUST00000211658 225 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.88□□□□□ -2.11
Col5a1O88207 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.88□□□□□ -2.11
Col5a1O88207 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col5a1O88207 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
Col5a1O88207 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col5a1O88207 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Col5a1O88207 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col5a1O88207 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Col5a1O88207 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC1.88□□□□□ -2.11
Col5a1O88207 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm12509-201ENSMUST00000118033 609 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm11891-201ENSMUST00000121241 619 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm22554-201ENSMUST00000157798 147 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm25044-201ENSMUST00000158603 104 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Mir3968-201ENSMUST00000175355 100 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm18691-201ENSMUST00000203593 872 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm7039-201ENSMUST00000205138 346 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm29817-201ENSMUST00000210098 172 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm46136-201ENSMUST00000214730 565 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm18729-201ENSMUST00000217230 621 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm7530-201ENSMUST00000218466 605 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm10088-201ENSMUST00000074116 423 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 AC116557.1-201ENSMUST00000219494 1521 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm24715-201ENSMUST00000102377 95 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm25170-201ENSMUST00000104191 129 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm25274-201ENSMUST00000104296 135 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Col5a1O88207 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm14238-201ENSMUST00000120227 323 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm15111-201ENSMUST00000122142 878 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm22555-201ENSMUST00000157801 62 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm26406-201ENSMUST00000158503 124 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm23269-201ENSMUST00000178701 107 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm2092-201ENSMUST00000178887 639 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm2759-201ENSMUST00000179938 639 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm8676-201ENSMUST00000184206 637 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm28404-201ENSMUST00000190242 453 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm7182-201ENSMUST00000193351 732 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC1.87□□□□□ -2.11
Col5a1O88207 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm38395-201ENSMUST00000199904 830 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm44449-201ENSMUST00000203610 153 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC1.87□□□□□ -2.11
Col5a1O88207 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.87□□□□□ -2.11
Col5a1O88207 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col5a1O88207 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
Col5a1O88207 Gm22683-201ENSMUST00000082854 137 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm25402-201ENSMUST00000082966 131 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 Gm23733-201ENSMUST00000083750 106 ntBASIC1.87□□□□□ -2.11
Col5a1O88207 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Col5a1O88207 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col5a1O88207 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms