Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm25832-201ENSMUST00000104140 130 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm14882-201ENSMUST00000117216 218 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm12513-201ENSMUST00000118617 352 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm5396-201ENSMUST00000121222 532 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.67□□□□□ -2.14
Sdc4O35988 U6.1-201ENSMUST00000157443 101 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm23205-201ENSMUST00000158671 103 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Sdc4O35988 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm29516-201ENSMUST00000190402 468 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm18433-201ENSMUST00000192747 197 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.67□□□□□ -2.14
Sdc4O35988 Gm18956-201ENSMUST00000192857 480 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm18982-201ENSMUST00000198118 529 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Gm9373-201ENSMUST00000208724 599 ntBASIC1.67□□□□□ -2.14
Sdc4O35988 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Sdc4O35988 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.67□□□□□ -2.14
Sdc4O35988 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Sdc4O35988 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Sdc4O35988 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Sdc4O35988 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Sdc4O35988 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Sdc4O35988 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Sdc4O35988 Gm14670-201ENSMUST00000117327 337 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Gm11252-201ENSMUST00000120572 939 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Gm26181-201ENSMUST00000157687 106 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Gm22483-201ENSMUST00000157986 274 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Atp2b4-208ENSMUST00000167348 243 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Sdc4O35988 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Mir3087-201ENSMUST00000199405 56 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Sdc4O35988 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Gm7065-201ENSMUST00000222150 474 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 AC139294.2-201ENSMUST00000227159 285 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Sdc4O35988 Gm23723-201ENSMUST00000082996 132 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.66□□□□□ -2.14
Sdc4O35988 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Sdc4O35988 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Sdc4O35988 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.65□□□□□ -2.15
Sdc4O35988 Gm4916-201ENSMUST00000126139 642 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Gm22560-201ENSMUST00000157332 120 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Sdc4O35988 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
Sdc4O35988 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Gm43901-201ENSMUST00000203247 453 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.65□□□□□ -2.15
Sdc4O35988 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 CT009733.1-201ENSMUST00000225322 425 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Gm24151-201ENSMUST00000082758 141 ntBASIC1.65□□□□□ -2.15
Sdc4O35988 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm24049-201ENSMUST00000102409 100 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Mir3096-201ENSMUST00000116685 71 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm24907-201ENSMUST00000116932 128 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm15161-201ENSMUST00000117340 387 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm13876-201ENSMUST00000118451 261 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm7592-201ENSMUST00000160674 627 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm27511-201ENSMUST00000183502 127 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29299-201ENSMUST00000185609 923 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms