Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm21572-201ENSMUST00000180134 498 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm21529-201ENSMUST00000180175 498 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm29370-202ENSMUST00000187476 499 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm44083-201ENSMUST00000203114 337 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm44063-201ENSMUST00000203307 376 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm18540-201ENSMUST00000204025 526 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm44858-201ENSMUST00000207360 154 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm6012-201ENSMUST00000210821 730 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Gm9318-201ENSMUST00000222444 438 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shisa8J3QNX5 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm22269-201ENSMUST00000104002 130 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm14622-201ENSMUST00000117117 468 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm11490-201ENSMUST00000118128 272 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm15613-201ENSMUST00000118396 326 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm13692-201ENSMUST00000120774 371 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm22038-201ENSMUST00000157277 242 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm22034-201ENSMUST00000157283 134 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm24745-201ENSMUST00000157840 85 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm22891-201ENSMUST00000158641 164 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm8207-201ENSMUST00000171204 502 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm24168-201ENSMUST00000178825 107 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm9022-202ENSMUST00000183285 483 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm37029-201ENSMUST00000195773 239 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm44294-201ENSMUST00000205090 728 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm29818-201ENSMUST00000218070 165 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm5548-201ENSMUST00000055878 397 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm23932-201ENSMUST00000082914 107 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm23679-201ENSMUST00000083161 119 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm25410-201ENSMUST00000083758 137 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm26165-201ENSMUST00000083791 138 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Gm381-201ENSMUST00000117443 2037 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Shisa8J3QNX5 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 AA413626-201ENSMUST00000121125 494 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm22843-201ENSMUST00000157710 134 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm3027-201ENSMUST00000167579 451 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm3104-201ENSMUST00000171004 473 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm24819-201ENSMUST00000175094 166 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm28860-201ENSMUST00000188103 313 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm20257-202ENSMUST00000188643 130 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm28155-201ENSMUST00000191066 151 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm44076-201ENSMUST00000203072 520 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm44208-201ENSMUST00000205199 421 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Olfr713-201ENSMUST00000098139 975 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.16□□□□□ -1.9
Shisa8J3QNX5 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.15□□□□□ -1.9
Shisa8J3QNX5 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Shisa8J3QNX5 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.15□□□□□ -1.9
Shisa8J3QNX5 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms