Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc180J3QNE4 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Gm38104-201ENSMUST00000195121 1895 ntBASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 U6.1-201ENSMUST00000157443 101 ntBASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Gm17538-201ENSMUST00000168236 327 ntBASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Gm27161-201ENSMUST00000183960 562 ntBASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Gm36974-201ENSMUST00000194200 1071 ntBASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.95□□□□□ -2.1
Ccdc180J3QNE4 Gm15095-201ENSMUST00000118996 1430 ntBASIC1.94□□□□□ -2.1
Ccdc180J3QNE4 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC1.94□□□□□ -2.1
Ccdc180J3QNE4 Gm19932-201ENSMUST00000177033 313 ntBASIC1.94□□□□□ -2.1
Ccdc180J3QNE4 Gm27419-201ENSMUST00000184576 109 ntBASIC1.94□□□□□ -2.1
Ccdc180J3QNE4 Gm22897-201ENSMUST00000197860 128 ntBASIC1.94□□□□□ -2.1
Ccdc180J3QNE4 Gm23623-201ENSMUST00000082461 107 ntBASIC1.94□□□□□ -2.1
Ccdc180J3QNE4 Gm12235-201ENSMUST00000118596 170 ntBASIC1.93□□□□□ -2.1
Ccdc180J3QNE4 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Ccdc180J3QNE4 Gm15067-201ENSMUST00000119534 156 ntBASIC1.93□□□□□ -2.1
Ccdc180J3QNE4 Gm44559-201ENSMUST00000207177 1012 ntBASIC1.93□□□□□ -2.1
Ccdc180J3QNE4 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC1.93□□□□□ -2.1
Ccdc180J3QNE4 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Ccdc180J3QNE4 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc180J3QNE4 Gm11786-201ENSMUST00000120799 155 ntBASIC1.92□□□□□ -2.1
Ccdc180J3QNE4 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.92□□□□□ -2.1
Ccdc180J3QNE4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.92□□□□□ -2.1
Ccdc180J3QNE4 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC1.92□□□□□ -2.1
Ccdc180J3QNE4 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Ccdc180J3QNE4 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.92□□□□□ -2.1
Ccdc180J3QNE4 Gm23435-201ENSMUST00000157183 156 ntBASIC1.91□□□□□ -2.1
Ccdc180J3QNE4 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc180J3QNE4 Gm3724-201ENSMUST00000197957 349 ntBASIC1.91□□□□□ -2.1
Ccdc180J3QNE4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.91□□□□□ -2.1
Ccdc180J3QNE4 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc180J3QNE4 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.9□□□□□ -2.1
Ccdc180J3QNE4 Gm23705-201ENSMUST00000104370 130 ntBASIC1.9□□□□□ -2.1
Ccdc180J3QNE4 Gm23991-201ENSMUST00000117033 93 ntBASIC1.9□□□□□ -2.1
Ccdc180J3QNE4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.9□□□□□ -2.1
Ccdc180J3QNE4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.9□□□□□ -2.1
Ccdc180J3QNE4 Snord14a-201ENSMUST00000082807 87 ntBASIC1.9□□□□□ -2.1
Ccdc180J3QNE4 Gm15659-201ENSMUST00000118881 341 ntBASIC1.9□□□□□ -2.11
Ccdc180J3QNE4 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.9□□□□□ -2.11
Ccdc180J3QNE4 Gm6913-201ENSMUST00000100019 348 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Gm14899-201ENSMUST00000118673 548 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Gm23783-201ENSMUST00000157941 102 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Gm3851-201ENSMUST00000168653 318 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Gm25730-201ENSMUST00000178753 165 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Mir6540-201ENSMUST00000184886 108 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Gm35931-201ENSMUST00000203931 448 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.89□□□□□ -2.11
Ccdc180J3QNE4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Gm28552-201ENSMUST00000190725 388 ntBASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Ccdc180J3QNE4 Gm14537-201ENSMUST00000117464 599 ntBASIC1.87□□□□□ -2.11
Ccdc180J3QNE4 Gm6829-201ENSMUST00000119858 360 ntBASIC1.87□□□□□ -2.11
Ccdc180J3QNE4 Gm27520-201ENSMUST00000184872 81 ntBASIC1.87□□□□□ -2.11
Ccdc180J3QNE4 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.87□□□□□ -2.11
Ccdc180J3QNE4 Gm22478-201ENSMUST00000122570 154 ntBASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Snord13-201ENSMUST00000157627 104 ntBASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Gm19649-201ENSMUST00000201126 822 ntBASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Gm43371-201ENSMUST00000202838 1031 ntBASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 AC105169.1-201ENSMUST00000218912 1294 ntBASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc180J3QNE4 Mir147-201ENSMUST00000102354 79 ntBASIC1.85□□□□□ -2.11
Ccdc180J3QNE4 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc180J3QNE4 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc180J3QNE4 Gm25787-201ENSMUST00000104709 92 ntBASIC1.84□□□□□ -2.11
Ccdc180J3QNE4 Gm22485-201ENSMUST00000157990 109 ntBASIC1.84□□□□□ -2.11
Ccdc180J3QNE4 Gm9071-201ENSMUST00000165915 474 ntBASIC1.84□□□□□ -2.11
Ccdc180J3QNE4 Gm27427-201ENSMUST00000185134 193 ntBASIC1.84□□□□□ -2.11
Ccdc180J3QNE4 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC1.84□□□□□ -2.11
Ccdc180J3QNE4 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.84□□□□□ -2.11
Ccdc180J3QNE4 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.84□□□□□ -2.12
Ccdc180J3QNE4 Gm13876-201ENSMUST00000118451 261 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm25341-201ENSMUST00000157461 268 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm44266-201ENSMUST00000205235 500 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 AC132121.1-201ENSMUST00000220774 332 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm14786-201ENSMUST00000117127 944 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm23207-201ENSMUST00000158665 102 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm22254-201ENSMUST00000179186 110 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm44830-201ENSMUST00000207667 584 ntBASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ccdc180J3QNE4 Gm13903-201ENSMUST00000120945 193 ntBASIC1.82□□□□□ -2.12
Ccdc180J3QNE4 Gm26089-201ENSMUST00000157898 107 ntBASIC1.82□□□□□ -2.12
Ccdc180J3QNE4 Gm22945-201ENSMUST00000158557 157 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms