Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm23608-201ENSMUST00000104545 128 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm14878-201ENSMUST00000118167 293 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm14877-201ENSMUST00000119803 478 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm24113-201ENSMUST00000157477 276 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm22113-201ENSMUST00000158343 104 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm24348-201ENSMUST00000158710 130 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm17187-201ENSMUST00000164622 410 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm23415-201ENSMUST00000175519 83 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm24487-201ENSMUST00000178017 63 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Mir6963-201ENSMUST00000183535 71 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Mir6336-201ENSMUST00000183581 130 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Mir7031-201ENSMUST00000183860 65 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm29429-201ENSMUST00000187071 121 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm37878-201ENSMUST00000192108 387 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm20203-201ENSMUST00000192352 332 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm36946-201ENSMUST00000192706 435 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Mir7661-201ENSMUST00000197023 61 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm43600-201ENSMUST00000202134 223 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm23625-201ENSMUST00000082457 100 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm22936-201ENSMUST00000103955 126 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm15029-201ENSMUST00000119742 199 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm22611-201ENSMUST00000158288 150 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Mir6926-201ENSMUST00000184562 68 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm43529-201ENSMUST00000199178 412 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm17887-201ENSMUST00000200194 547 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm6105-201ENSMUST00000200580 624 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm19786-201ENSMUST00000222589 580 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdh1F7BJK1 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Mir92b-201ENSMUST00000102300 83 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm23226-201ENSMUST00000116927 103 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm15244-201ENSMUST00000121122 130 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm23752-201ENSMUST00000157584 115 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm24750-201ENSMUST00000157843 104 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm16303-201ENSMUST00000161498 390 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm27896-201ENSMUST00000175162 317 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm24264-201ENSMUST00000179835 94 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm23925-202ENSMUST00000188429 132 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm25147-201ENSMUST00000083030 105 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Snord47-201ENSMUST00000083034 77 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm23464-201ENSMUST00000083145 147 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm22973-201ENSMUST00000083298 191 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Gm22826-201ENSMUST00000083774 165 ntBASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Pcdh1F7BJK1 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Pcdh1F7BJK1 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.77□□□□□ -1.81
Pcdh1F7BJK1 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.77□□□□□ -1.81
Pcdh1F7BJK1 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms