Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm18488-201ENSMUST00000215082 364 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm37311-201ENSMUST00000195541 2024 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm44655-201ENSMUST00000207768 423 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm24208-201ENSMUST00000082783 135 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm25697-201ENSMUST00000082902 98 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Snord118-201ENSMUST00000082965 135 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm22853-201ENSMUST00000174974 131 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm23152-201ENSMUST00000175322 116 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Gm45522-201ENSMUST00000210784 166 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Mir423-201ENSMUST00000083584 109 ntBASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Col6a3E9PWQ3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm14678-201ENSMUST00000121396 482 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm25220-201ENSMUST00000157546 95 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm23355-201ENSMUST00000177614 107 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm23721-201ENSMUST00000083005 107 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm23702-201ENSMUST00000158840 130 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Mir6379-201ENSMUST00000183392 115 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Mir6950-201ENSMUST00000184438 73 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Snord104-201ENSMUST00000083192 70 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.11□□□□□ -2.23
Col6a3E9PWQ3 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Gm14669-201ENSMUST00000118841 250 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Gm25806-201ENSMUST00000122782 122 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Gm22423-201ENSMUST00000082861 184 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Gm23585-201ENSMUST00000157656 102 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Gm24770-201ENSMUST00000158505 92 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Gm27698-201ENSMUST00000184060 249 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.1□□□□□ -2.23
Col6a3E9PWQ3 Mir223-201ENSMUST00000102112 110 ntBASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Gm25339-201ENSMUST00000157458 232 ntBASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Samd15-201ENSMUST00000169669 1194 ntBASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Gm27580-201ENSMUST00000183666 149 ntBASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Gm26285-201ENSMUST00000177923 107 ntBASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Gm23622-201ENSMUST00000082460 107 ntBASIC1.09□□□□□ -2.23
Col6a3E9PWQ3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Col6a3E9PWQ3 Snrpert-201ENSMUST00000121967 279 ntBASIC1.09□□□□□ -2.24
Col6a3E9PWQ3 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.09□□□□□ -2.24
Col6a3E9PWQ3 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.24
Col6a3E9PWQ3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Col6a3E9PWQ3 Gm25885-201ENSMUST00000157779 109 ntBASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 Gm25991-201ENSMUST00000102439 99 ntBASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Col6a3E9PWQ3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm25110-201ENSMUST00000116684 121 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm25775-201ENSMUST00000116716 121 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm24795-201ENSMUST00000116737 121 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm25171-201ENSMUST00000116926 121 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm22757-201ENSMUST00000102279 96 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm44585-201ENSMUST00000207150 607 ntBASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC1.07□□□□□ -2.24
Col6a3E9PWQ3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Gm25658-201ENSMUST00000158472 128 ntBASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Gm28058-201ENSMUST00000186421 264 ntBASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Gm13743-201ENSMUST00000121486 724 ntBASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Gm37281-201ENSMUST00000192412 439 ntBASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Gm12309-201ENSMUST00000119889 182 ntBASIC1.06□□□□□ -2.24
Col6a3E9PWQ3 Gm14591-201ENSMUST00000120407 518 ntBASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 Gm8532-201ENSMUST00000179174 461 ntBASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 Gm9318-201ENSMUST00000222444 438 ntBASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 Gm18953-201ENSMUST00000175694 300 ntBASIC1.05□□□□□ -2.24
Col6a3E9PWQ3 Mir211-201ENSMUST00000083651 106 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms