Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm11359-201ENSMUST00000120039 567 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm15112-201ENSMUST00000120152 860 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm22478-201ENSMUST00000122570 154 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm24911-201ENSMUST00000157292 136 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Snord13-201ENSMUST00000157627 104 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm24348-201ENSMUST00000158710 130 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm22665-201ENSMUST00000158720 275 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm23704-201ENSMUST00000158844 340 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm7346-201ENSMUST00000169661 476 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm17113-201ENSMUST00000170118 171 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm18775-201ENSMUST00000190763 586 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm37987-201ENSMUST00000194999 825 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm43978-201ENSMUST00000203491 451 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm44720-201ENSMUST00000206076 260 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm44634-201ENSMUST00000206119 152 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm26439-201ENSMUST00000082592 106 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm22683-201ENSMUST00000082854 137 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Mir208a-201ENSMUST00000083498 83 ntBASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.1□□□□□ -2.23
Trav8-1A0A075B641 Gm19074-201ENSMUST00000218915 1429 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Mir804-201ENSMUST00000103251 95 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm14835-201ENSMUST00000119039 315 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm12935-201ENSMUST00000119352 246 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm14363-201ENSMUST00000122304 409 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm26101-201ENSMUST00000157246 105 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm24534-201ENSMUST00000157949 291 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Mir5129-201ENSMUST00000174938 78 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm22192-201ENSMUST00000175128 85 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm22131-201ENSMUST00000178415 94 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm27599-201ENSMUST00000183758 174 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm28453-203ENSMUST00000187041 189 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm28383-201ENSMUST00000187563 139 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm29262-201ENSMUST00000190084 196 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm9318-201ENSMUST00000222444 438 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Gm25632-201ENSMUST00000083112 85 ntBASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trav8-1A0A075B641 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Trav8-1A0A075B641 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm22755-201ENSMUST00000157143 100 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm22315-201ENSMUST00000158010 143 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm24551-201ENSMUST00000158645 92 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm24878-201ENSMUST00000158782 104 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm24875-201ENSMUST00000158888 104 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm24174-201ENSMUST00000158933 111 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm29550-201ENSMUST00000185543 285 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm43708-201ENSMUST00000198857 961 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm44794-201ENSMUST00000206550 411 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Gm20948-201ENSMUST00000211091 449 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 AC154257.2-201ENSMUST00000224166 340 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Mir193a-201ENSMUST00000083461 66 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Olfr1160-201ENSMUST00000099839 960 ntBASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Trav8-1A0A075B641 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm25647-201ENSMUST00000101832 78 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm25823-201ENSMUST00000101995 78 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm22674-201ENSMUST00000104413 131 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm14517-201ENSMUST00000119040 337 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm25335-201ENSMUST00000158043 103 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm15508-201ENSMUST00000160330 325 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm17655-201ENSMUST00000167969 255 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm24220-201ENSMUST00000177753 79 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm25988-201ENSMUST00000177759 79 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm23471-201ENSMUST00000177886 79 ntBASIC1.07□□□□□ -2.24
Trav8-1A0A075B641 Gm26488-201ENSMUST00000178225 79 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms