Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm24792-201ENSMUST00000104286 128 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm23609-201ENSMUST00000104542 127 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm14670-201ENSMUST00000117327 337 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm6274-201ENSMUST00000118173 797 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.29□□□□□ -2.04
Trem1Q9JKE2 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm24908-201ENSMUST00000157294 127 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm22849-201ENSMUST00000157713 307 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm22527-201ENSMUST00000158816 106 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm17062-201ENSMUST00000166987 461 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm28163-201ENSMUST00000187099 325 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm3489-201ENSMUST00000190083 528 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm37000-201ENSMUST00000193058 428 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm33354-201ENSMUST00000195448 906 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm45420-201ENSMUST00000211243 425 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Gm6369-201ENSMUST00000069626 412 ntBASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem1Q9JKE2 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Mir1192-201ENSMUST00000116976 121 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm14868-201ENSMUST00000117840 216 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm15177-201ENSMUST00000120491 577 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm15272-201ENSMUST00000120865 233 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm22382-201ENSMUST00000158185 130 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm3221-201ENSMUST00000164869 440 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm36966-201ENSMUST00000192217 413 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm43932-201ENSMUST00000204499 52 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm44554-201ENSMUST00000208738 147 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm9068-201ENSMUST00000217393 455 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm22247-201ENSMUST00000082476 131 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.28□□□□□ -2.04
Trem1Q9JKE2 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm24049-201ENSMUST00000102409 100 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm22037-201ENSMUST00000157280 296 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm25427-201ENSMUST00000157605 103 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm22098-201ENSMUST00000157930 85 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm25977-201ENSMUST00000158697 85 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm15946-201ENSMUST00000160654 423 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm17166-201ENSMUST00000172006 431 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Mir3104-201ENSMUST00000174911 63 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm21744-201ENSMUST00000178403 662 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm21171-201ENSMUST00000180048 673 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm25873-201ENSMUST00000180317 107 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Mir7667-201ENSMUST00000183866 63 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm28000-201ENSMUST00000184380 85 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm29413-201ENSMUST00000186019 880 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm28627-201ENSMUST00000186141 453 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm28700-201ENSMUST00000187614 579 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm29639-201ENSMUST00000188375 580 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm28843-201ENSMUST00000189198 678 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm29546-201ENSMUST00000191171 678 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm44472-201ENSMUST00000204922 943 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm44824-201ENSMUST00000207021 229 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm44954-201ENSMUST00000208513 227 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm46146-201ENSMUST00000217483 346 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Olfr197-201ENSMUST00000080031 926 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Mir350-201ENSMUST00000083639 99 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Gm25257-201ENSMUST00000083907 110 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms