Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm18026-201ENSMUST00000222789 727 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm25856-201ENSMUST00000082786 75 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm26002-201ENSMUST00000101915 107 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm23885-201ENSMUST00000122682 294 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm23212-201ENSMUST00000122718 60 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm23053-201ENSMUST00000175136 96 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm28779-201ENSMUST00000189678 323 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm28648-201ENSMUST00000190092 343 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm19224-201ENSMUST00000190477 793 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm37866-201ENSMUST00000191950 696 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm43070-201ENSMUST00000196938 415 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm43669-201ENSMUST00000198229 436 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm44125-201ENSMUST00000203068 448 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Scn5aQ9JJV9 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scn5aQ9JJV9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 Gm22810-201ENSMUST00000082741 158 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn5aQ9JJV9 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.55□□□□□ -2
Scn5aQ9JJV9 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm3940-201ENSMUST00000105087 432 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm15025-201ENSMUST00000118434 418 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm26271-201ENSMUST00000158349 104 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm20534-201ENSMUST00000172957 172 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm27470-201ENSMUST00000184070 210 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm37417-201ENSMUST00000195257 454 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm23950-201ENSMUST00000104026 129 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm9850-201ENSMUST00000117916 227 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Mir6905-201ENSMUST00000184228 70 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm37523-201ENSMUST00000194901 412 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm44050-201ENSMUST00000204263 527 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm7675-201ENSMUST00000208828 686 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm26128-201ENSMUST00000083170 110 ntBASIC2.54□□□□□ -2
Scn5aQ9JJV9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn5aQ9JJV9 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm15176-201ENSMUST00000117734 135 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm11819-201ENSMUST00000122192 372 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm22957-201ENSMUST00000122511 123 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm23538-201ENSMUST00000157535 101 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm23317-201ENSMUST00000157999 129 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm17186-201ENSMUST00000171742 456 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Mir7j-201ENSMUST00000184427 122 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Mir7017-201ENSMUST00000184894 62 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm37576-201ENSMUST00000194228 372 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm26055-201ENSMUST00000083038 107 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Mir322-201ENSMUST00000083484 95 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm25008-201ENSMUST00000083809 81 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.53□□□□□ -2
Scn5aQ9JJV9 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.53□□□□□ -2
Scn5aQ9JJV9 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Scn5aQ9JJV9 Gm11253-201ENSMUST00000118486 201 ntBASIC2.52□□□□□ -2.01
Scn5aQ9JJV9 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms