Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm7258-201ENSMUST00000179317 300 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm24264-201ENSMUST00000179835 94 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm29610-201ENSMUST00000187749 453 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm37338-201ENSMUST00000191986 127 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm42694-201ENSMUST00000196951 358 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm44879-201ENSMUST00000207007 503 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm2829-201ENSMUST00000213121 499 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm25480-201ENSMUST00000083217 133 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.6□□□□□ -1.67
Upf1Q9EPU0 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm23697-201ENSMUST00000103897 110 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Mir1195-201ENSMUST00000116818 98 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm15844-201ENSMUST00000118016 576 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm11923-201ENSMUST00000118135 508 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm11600-201ENSMUST00000119592 240 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm22328-201ENSMUST00000158074 112 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm20698-201ENSMUST00000175657 233 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm9830-201ENSMUST00000178509 357 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm37029-201ENSMUST00000195773 239 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm7948-201ENSMUST00000212607 844 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm26164-201ENSMUST00000083793 104 ntBASIC4.59□□□□□ -1.67
Upf1Q9EPU0 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.59□□□□□ -1.68
Upf1Q9EPU0 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Upf1Q9EPU0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm42755-201ENSMUST00000198533 1493 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm13873-201ENSMUST00000119208 427 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm25967-201ENSMUST00000157168 147 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm23752-201ENSMUST00000157584 115 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm24085-201ENSMUST00000175172 116 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm26141-201ENSMUST00000175299 126 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Mir195b-201ENSMUST00000184814 97 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29512-201ENSMUST00000185544 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28110-201ENSMUST00000185782 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28838-201ENSMUST00000186338 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29057-201ENSMUST00000186468 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29661-201ENSMUST00000186781 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28737-201ENSMUST00000186808 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29118-201ENSMUST00000186908 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28433-201ENSMUST00000187085 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29635-201ENSMUST00000187221 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28759-201ENSMUST00000187621 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28831-201ENSMUST00000187739 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28200-201ENSMUST00000187778 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29026-201ENSMUST00000187787 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28752-201ENSMUST00000188340 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28797-201ENSMUST00000188543 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28855-201ENSMUST00000188680 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29378-201ENSMUST00000188723 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28569-201ENSMUST00000188748 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28120-201ENSMUST00000188812 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28369-201ENSMUST00000188993 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29037-201ENSMUST00000189092 313 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28909-201ENSMUST00000189406 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28705-201ENSMUST00000189548 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28861-201ENSMUST00000189681 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29180-201ENSMUST00000190003 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28939-201ENSMUST00000190351 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28223-201ENSMUST00000190469 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29575-201ENSMUST00000190597 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm29092-201ENSMUST00000190768 315 ntBASIC4.58□□□□□ -1.68
Upf1Q9EPU0 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms