Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.08□□□□□ -2.08
Lsm1Q8VC85 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm29263-201ENSMUST00000188718 463 ntBASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm28384-201ENSMUST00000189079 463 ntBASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm37692-201ENSMUST00000192633 232 ntBASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm42578-201ENSMUST00000199960 194 ntBASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm18338-201ENSMUST00000222381 560 ntBASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm22740-201ENSMUST00000083439 109 ntBASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Lsm1Q8VC85 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm15497-201ENSMUST00000119137 551 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm15223-201ENSMUST00000120989 826 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm25637-201ENSMUST00000157529 107 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm24075-201ENSMUST00000158175 72 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm24816-201ENSMUST00000175311 151 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm8532-201ENSMUST00000179174 461 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm27369-201ENSMUST00000185182 71 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm28627-201ENSMUST00000186141 453 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Lsm1Q8VC85 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm22782-201ENSMUST00000104082 132 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm26143-201ENSMUST00000104480 108 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm8217-201ENSMUST00000119136 465 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm17119-201ENSMUST00000163943 280 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm17162-201ENSMUST00000168538 473 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm28755-201ENSMUST00000185773 199 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm7871-201ENSMUST00000195346 618 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm6796-201ENSMUST00000211919 243 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm2544-201ENSMUST00000222702 756 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm23452-201ENSMUST00000083327 107 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.06□□□□□ -2.08
Lsm1Q8VC85 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.06□□□□□ -2.08
Lsm1Q8VC85 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Gm14593-201ENSMUST00000119948 294 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Gm11430-201ENSMUST00000121317 217 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Gm15986-201ENSMUST00000122153 400 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Gm42665-201ENSMUST00000202100 586 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Gm21286-201ENSMUST00000098035 545 ntBASIC2.05□□□□□ -2.08
Lsm1Q8VC85 Gm24274-201ENSMUST00000116787 124 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm12598-201ENSMUST00000117333 830 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm13331-201ENSMUST00000117500 448 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm14915-201ENSMUST00000120747 204 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm22718-201ENSMUST00000122701 315 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm24857-201ENSMUST00000158061 310 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm26214-201ENSMUST00000158581 107 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm3489-201ENSMUST00000190083 528 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Mir497-201ENSMUST00000200557 84 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm43659-201ENSMUST00000200894 628 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Gm34701-202ENSMUST00000204685 360 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Lsm1Q8VC85 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.04□□□□□ -2.08
Lsm1Q8VC85 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Lsm1Q8VC85 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.04□□□□□ -2.08
Lsm1Q8VC85 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Lsm1Q8VC85 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms