Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm16419-201ENSMUST00000221057 625 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Mir673-201ENSMUST00000102361 91 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm22021-201ENSMUST00000104353 107 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm14897-201ENSMUST00000118213 207 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm15613-201ENSMUST00000118396 326 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm11785-201ENSMUST00000120165 601 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm23326-201ENSMUST00000157419 105 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm24059-201ENSMUST00000157493 312 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm25637-201ENSMUST00000157529 107 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm24780-201ENSMUST00000157635 143 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm24739-201ENSMUST00000158855 292 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm25671-201ENSMUST00000178612 105 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm23307-201ENSMUST00000179167 105 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm25286-201ENSMUST00000179790 105 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Mir6715-201ENSMUST00000184990 57 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm27249-201ENSMUST00000185049 328 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm32340-201ENSMUST00000192883 259 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm32381-201ENSMUST00000203192 476 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Gm45380-201ENSMUST00000210465 315 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Olfr895-201ENSMUST00000093864 951 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Ushbp1Q8R370 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm14919-201ENSMUST00000120839 390 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm8880-201ENSMUST00000121800 454 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm14694-201ENSMUST00000121856 282 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm25339-201ENSMUST00000157458 232 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm23411-201ENSMUST00000157988 62 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Mir1934-201ENSMUST00000158127 83 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm22085-201ENSMUST00000158344 110 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm24546-201ENSMUST00000158652 102 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm28155-201ENSMUST00000191066 151 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm44161-201ENSMUST00000203532 253 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Snord42a-201ENSMUST00000082606 65 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm25800-201ENSMUST00000082636 134 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.11□□□□□ -1.75
Ushbp1Q8R370 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm12255-201ENSMUST00000117184 284 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm13076-201ENSMUST00000118041 204 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm25967-201ENSMUST00000157168 147 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm24244-201ENSMUST00000157317 130 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm22380-201ENSMUST00000157479 95 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm23257-201ENSMUST00000158322 132 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm26180-201ENSMUST00000179942 107 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm28408-201ENSMUST00000191557 463 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm17966-201ENSMUST00000193453 594 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.1□□□□□ -1.75
Ushbp1Q8R370 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ushbp1Q8R370 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms