Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm10105-201ENSMUST00000184601 270 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm27743-201ENSMUST00000185136 126 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm18505-201ENSMUST00000187360 790 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm44870-201ENSMUST00000207291 357 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm45387-201ENSMUST00000209792 632 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm45327-201ENSMUST00000211612 565 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm17990-201ENSMUST00000211728 553 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm8249-201ENSMUST00000219225 465 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm24533-201ENSMUST00000083138 196 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.03□□□□□ -1.77
Vps53Q8CCB4 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm25376-201ENSMUST00000104340 133 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm11367-201ENSMUST00000117802 120 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm11598-201ENSMUST00000119257 357 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm12412-201ENSMUST00000121867 328 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm25438-201ENSMUST00000158281 110 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm17119-201ENSMUST00000163943 280 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm28418-201ENSMUST00000186179 423 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm21673-201ENSMUST00000186640 436 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm21135-201ENSMUST00000189023 436 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm19193-201ENSMUST00000190263 590 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm44373-201ENSMUST00000196112 169 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm43406-201ENSMUST00000200356 334 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm44041-201ENSMUST00000203678 396 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm44989-201ENSMUST00000204749 217 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm5322-201ENSMUST00000206142 699 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm44600-201ENSMUST00000208540 111 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm8274-201ENSMUST00000219820 463 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.02□□□□□ -1.77
Vps53Q8CCB4 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 AF357341-201ENSMUST00000083088 75 ntBASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Vps53Q8CCB4 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Snord70-201ENSMUST00000104157 87 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm14810-201ENSMUST00000121628 486 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm12872-201ENSMUST00000121835 320 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm25339-201ENSMUST00000157458 232 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm24857-201ENSMUST00000158061 310 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm22945-201ENSMUST00000158557 157 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm26468-201ENSMUST00000158644 106 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm25243-201ENSMUST00000174912 207 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm23523-201ENSMUST00000180190 107 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm27640-201ENSMUST00000184580 147 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm28579-201ENSMUST00000186143 369 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm44084-201ENSMUST00000203947 409 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm44060-201ENSMUST00000204440 410 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Snora70-201ENSMUST00000083047 137 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm25579-201ENSMUST00000083407 106 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm25630-201ENSMUST00000084000 162 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.01□□□□□ -1.77
Vps53Q8CCB4 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Vps53Q8CCB4 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm22021-201ENSMUST00000104353 107 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm8217-201ENSMUST00000119136 465 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4□□□□□ -1.77
Vps53Q8CCB4 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm24138-201ENSMUST00000157572 114 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm24546-201ENSMUST00000158652 102 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm23191-201ENSMUST00000179147 107 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm42832-201ENSMUST00000196361 745 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm42594-201ENSMUST00000199511 246 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
Vps53Q8CCB4 AC166358.7-201ENSMUST00000221132 108 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 AC121966.1-201ENSMUST00000221458 282 ntBASIC4□□□□□ -1.77
Vps53Q8CCB4 AC125543.5-201ENSMUST00000222799 108 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms