Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm24767-201ENSMUST00000158509 95 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 Gm24277-201ENSMUST00000158661 104 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 Gm23450-201ENSMUST00000178285 91 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim35Q8C006 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim35Q8C006 Gm44703-201ENSMUST00000205724 248 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim35Q8C006 Snora44-201ENSMUST00000082670 129 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 Gm26121-201ENSMUST00000083364 162 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim35Q8C006 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim35Q8C006 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim35Q8C006 BC022960-201ENSMUST00000119987 1815 ntBASIC5.8□□□□□ -1.48
Trim35Q8C006 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim35Q8C006 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim35Q8C006 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim35Q8C006 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Trim35Q8C006 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim35Q8C006 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim35Q8C006 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim35Q8C006 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm24396-201ENSMUST00000116905 93 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm23859-201ENSMUST00000158383 64 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm29408-201ENSMUST00000187536 216 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim35Q8C006 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm46223-201ENSMUST00000215196 675 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm4510-201ENSMUST00000218265 427 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim35Q8C006 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim35Q8C006 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim35Q8C006 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm44240-201ENSMUST00000204015 2654 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Gm18751-201ENSMUST00000185777 2013 ntBASIC5.79□□□□□ -1.48
Trim35Q8C006 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim35Q8C006 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim35Q8C006 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm10811-201ENSMUST00000221985 2448 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm15331-201ENSMUST00000120225 385 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm12466-201ENSMUST00000121199 620 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm24719-201ENSMUST00000157520 110 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm24961-201ENSMUST00000157918 184 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm25923-201ENSMUST00000158312 138 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Mir5125-201ENSMUST00000175240 79 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Mir6911-201ENSMUST00000184241 69 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim35Q8C006 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm5830-201ENSMUST00000049117 443 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Gm23502-201ENSMUST00000083902 145 ntBASIC5.78□□□□□ -1.48
Trim35Q8C006 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim35Q8C006 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim35Q8C006 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim35Q8C006 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim35Q8C006 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim35Q8C006 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim35Q8C006 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim35Q8C006 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm22724-201ENSMUST00000158091 127 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm22605-201ENSMUST00000158289 108 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm28992-201ENSMUST00000190534 139 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm44564-201ENSMUST00000207985 180 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 AC124687.1-201ENSMUST00000221868 189 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 AC149294.9-201ENSMUST00000227256 164 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm22978-201ENSMUST00000082607 160 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 Gm10212-201ENSMUST00000087884 324 ntBASIC5.77□□□□□ -1.49
Trim35Q8C006 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim35Q8C006 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim35Q8C006 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms