Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm6842-201ENSMUST00000211361 390 ntBASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Gm6796-201ENSMUST00000211919 243 ntBASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Gm23041-201ENSMUST00000083868 106 ntBASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Pcdh19Q80TF3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm13321-201ENSMUST00000117101 400 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm13714-201ENSMUST00000117313 221 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm23752-201ENSMUST00000157584 115 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm27883-201ENSMUST00000183941 102 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm6802-202ENSMUST00000186566 126 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm9402-201ENSMUST00000196849 388 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm43427-201ENSMUST00000198188 331 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm43991-201ENSMUST00000203751 274 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm44960-201ENSMUST00000207403 141 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm19786-201ENSMUST00000222589 580 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm22297-201ENSMUST00000083312 106 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm7381-201ENSMUST00000098958 300 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.42□□□□□ -1.7
Pcdh19Q80TF3 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm650-201ENSMUST00000144428 1551 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm15426-201ENSMUST00000117823 556 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm12238-201ENSMUST00000127764 124 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm23232-201ENSMUST00000157300 105 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm25599-201ENSMUST00000157816 103 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm22611-201ENSMUST00000158288 150 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Mir6960-201ENSMUST00000183449 61 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm43955-201ENSMUST00000204332 142 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm17811-201ENSMUST00000206193 387 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm18462-201ENSMUST00000208112 417 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm9616-201ENSMUST00000221154 781 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm10916-201ENSMUST00000080330 483 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm25078-201ENSMUST00000082530 107 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm22685-201ENSMUST00000082848 106 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh19Q80TF3 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Pcdh19Q80TF3 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Mir761-201ENSMUST00000103245 76 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm22936-201ENSMUST00000103955 126 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Snord66-201ENSMUST00000104051 75 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm24125-201ENSMUST00000104105 137 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm25938-201ENSMUST00000104139 166 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm15244-201ENSMUST00000121122 130 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm5391-201ENSMUST00000121155 613 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm14303-201ENSMUST00000121320 171 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm24839-201ENSMUST00000122602 107 ntBASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.4□□□□□ -1.71
Pcdh19Q80TF3 Gm23121-201ENSMUST00000157653 173 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms