Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm17522-201ENSMUST00000178144 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21599-201ENSMUST00000178249 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm22166-201ENSMUST00000178419 121 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21914-201ENSMUST00000178452 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21723-201ENSMUST00000178692 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21916-201ENSMUST00000178771 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21801-201ENSMUST00000178865 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21633-201ENSMUST00000178941 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm23288-201ENSMUST00000179213 121 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm25361-201ENSMUST00000179358 76 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21821-201ENSMUST00000179646 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21588-201ENSMUST00000180074 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21780-201ENSMUST00000180128 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21572-201ENSMUST00000180134 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm21529-201ENSMUST00000180175 498 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm29370-202ENSMUST00000187476 499 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm37757-201ENSMUST00000193072 210 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm44961-201ENSMUST00000207450 196 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.86□□□□□ -1.95
Snrnp40Q6PE01 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm14448-201ENSMUST00000116383 210 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm13343-201ENSMUST00000116474 105 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm14293-201ENSMUST00000118528 577 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm8880-201ENSMUST00000121800 454 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm17187-201ENSMUST00000164622 410 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm8207-201ENSMUST00000171204 502 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm27532-201ENSMUST00000183726 113 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm7837-201ENSMUST00000190873 412 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm24350-202ENSMUST00000198309 132 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm43899-201ENSMUST00000203675 246 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm44910-201ENSMUST00000208451 396 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Snrnp40Q6PE01 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm22658-201ENSMUST00000104196 155 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm13510-201ENSMUST00000118659 429 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm15443-201ENSMUST00000118947 820 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm11359-201ENSMUST00000120039 567 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm14049-201ENSMUST00000121009 636 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm22187-201ENSMUST00000157819 129 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm23704-201ENSMUST00000158844 340 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm26297-201ENSMUST00000179464 132 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm32222-201ENSMUST00000203296 298 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm44818-201ENSMUST00000206608 358 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Mir208a-201ENSMUST00000083498 83 ntBASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Snrnp40Q6PE01 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
Snrnp40Q6PE01 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Snrnp40Q6PE01 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Snrnp40Q6PE01 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Snrnp40Q6PE01 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Snrnp40Q6PE01 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Snrnp40Q6PE01 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
Snrnp40Q6PE01 Gm26423-201ENSMUST00000104277 128 ntBASIC2.83□□□□□ -1.96
Snrnp40Q6PE01 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.83□□□□□ -1.96
Snrnp40Q6PE01 Gm11253-201ENSMUST00000118486 201 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms