Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm25157-201ENSMUST00000178914 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm23313-201ENSMUST00000178931 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l17-201ENSMUST00000178936 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm23089-201ENSMUST00000178947 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm22046-201ENSMUST00000179027 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm24153-201ENSMUST00000179280 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm25597-201ENSMUST00000179388 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm22941-201ENSMUST00000179630 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm25816-201ENSMUST00000179764 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm26188-201ENSMUST00000179963 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm25471-201ENSMUST00000180126 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm26433-201ENSMUST00000180227 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm22128-201ENSMUST00000180346 94 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm43402-201ENSMUST00000197159 159 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Gm24147-201ENSMUST00000082763 144 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Mir30e-201ENSMUST00000083475 92 ntBASIC4.71□□□□□ -1.66
Best3Q6H1V1 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Best3Q6H1V1 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Best3Q6H1V1 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm14841-201ENSMUST00000121067 758 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm14562-201ENSMUST00000129885 543 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm25902-201ENSMUST00000158493 318 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm23579-201ENSMUST00000158528 103 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm26400-201ENSMUST00000175012 85 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm24086-201ENSMUST00000175171 98 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm9379-201ENSMUST00000196790 646 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm44521-201ENSMUST00000206469 217 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.7□□□□□ -1.66
Best3Q6H1V1 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Gm23406-201ENSMUST00000082537 122 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.7□□□□□ -1.66
Best3Q6H1V1 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Best3Q6H1V1 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm26273-201ENSMUST00000104180 131 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm23168-201ENSMUST00000157156 143 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.69□□□□□ -1.66
Best3Q6H1V1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm28995-201ENSMUST00000186625 261 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm45513-201ENSMUST00000210228 376 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm23925-201ENSMUST00000082471 132 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Best3Q6H1V1 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Best3Q6H1V1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Best3Q6H1V1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Best3Q6H1V1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm11262-201ENSMUST00000119326 833 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm14687-201ENSMUST00000120206 363 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm22073-201ENSMUST00000122668 189 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm6058-201ENSMUST00000154261 399 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm27926-201ENSMUST00000157180 66 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm20923-201ENSMUST00000190009 319 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm34073-201ENSMUST00000195736 212 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Gm18982-201ENSMUST00000198118 529 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.68□□□□□ -1.66
Best3Q6H1V1 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Best3Q6H1V1 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Best3Q6H1V1 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Best3Q6H1V1 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.67□□□□□ -1.66
Best3Q6H1V1 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms