Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm17159-201ENSMUST00000169043 482 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm20534-201ENSMUST00000172957 172 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm18540-201ENSMUST00000204025 526 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm5002-201ENSMUST00000207145 223 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm6462-201ENSMUST00000081488 304 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sh3rf1Q69ZI1 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm23577-201ENSMUST00000103950 110 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm22498-201ENSMUST00000104497 86 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm15846-201ENSMUST00000116022 320 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm23990-201ENSMUST00000117031 117 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm11429-201ENSMUST00000119089 144 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm15244-201ENSMUST00000121122 130 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm24774-201ENSMUST00000157384 134 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm23905-201ENSMUST00000157568 109 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm22536-201ENSMUST00000158171 134 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm24520-201ENSMUST00000179510 110 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm7329-201ENSMUST00000185915 210 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm5329-201ENSMUST00000186898 463 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm43427-201ENSMUST00000198188 331 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm4045-201ENSMUST00000204076 310 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm44521-201ENSMUST00000206469 217 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm45315-201ENSMUST00000209283 333 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm45499-201ENSMUST00000211656 280 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm8942-201ENSMUST00000217892 400 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 AC164561.1-201ENSMUST00000220414 115 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm3338-201ENSMUST00000220982 269 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm24148-201ENSMUST00000082762 80 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm23510-201ENSMUST00000083083 163 ntBASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Sh3rf1Q69ZI1 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Mir690-201ENSMUST00000102110 109 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Mir687-201ENSMUST00000102166 89 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm6274-201ENSMUST00000118173 797 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm23232-201ENSMUST00000157300 105 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm2389-201ENSMUST00000160487 189 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm20526-201ENSMUST00000173416 158 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Mir3620-201ENSMUST00000184710 61 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm29597-201ENSMUST00000188035 308 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm7093-201ENSMUST00000223004 581 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm26066-201ENSMUST00000083385 109 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sh3rf1Q69ZI1 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Gm14803-201ENSMUST00000117163 361 ntBASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Gm13457-201ENSMUST00000117885 267 ntBASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Gm13541-201ENSMUST00000119519 283 ntBASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Gm14303-201ENSMUST00000121320 171 ntBASIC4.37□□□□□ -1.71
Sh3rf1Q69ZI1 Gm22026-201ENSMUST00000122735 281 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms