Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm23733-201ENSMUST00000083750 106 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm25008-201ENSMUST00000083809 81 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim28Q62318 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim28Q62318 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim28Q62318 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Trim28Q62318 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim28Q62318 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim28Q62318 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim28Q62318 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Trim28Q62318 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim28Q62318 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim28Q62318 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim28Q62318 Gm26430-201ENSMUST00000178054 107 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm23191-201ENSMUST00000179147 107 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm27952-201ENSMUST00000184748 105 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm28781-201ENSMUST00000185760 696 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm29307-201ENSMUST00000187367 696 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm29339-201ENSMUST00000189613 696 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm28717-201ENSMUST00000189950 315 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm29407-201ENSMUST00000191468 696 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm7182-201ENSMUST00000193351 732 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm18433-202ENSMUST00000195682 196 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm44063-201ENSMUST00000203307 376 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim28Q62318 Gm20039-201ENSMUST00000210329 394 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim28Q62318 Snord21-201ENSMUST00000082519 94 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim28Q62318 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim28Q62318 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.37□□□□□ -1.71
Trim28Q62318 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim28Q62318 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim28Q62318 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim28Q62318 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim28Q62318 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim28Q62318 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim28Q62318 Gm11221-201ENSMUST00000117230 597 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm11936-201ENSMUST00000118323 160 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm14517-201ENSMUST00000119040 337 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm14129-201ENSMUST00000122436 291 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm23585-201ENSMUST00000157656 102 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm25194-201ENSMUST00000177987 79 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm19193-201ENSMUST00000190263 590 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim28Q62318 Gm44083-201ENSMUST00000203114 337 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm6112-201ENSMUST00000208037 629 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim28Q62318 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim28Q62318 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim28Q62318 Gm23297-201ENSMUST00000083184 127 ntBASIC4.36□□□□□ -1.71
Trim28Q62318 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim28Q62318 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim28Q62318 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim28Q62318 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim28Q62318 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim28Q62318 Gm23578-201ENSMUST00000103943 104 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm15211-201ENSMUST00000118932 528 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm12118-201ENSMUST00000119766 532 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm12226-201ENSMUST00000144172 876 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm23860-201ENSMUST00000179446 132 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim28Q62318 Gm44016-201ENSMUST00000203463 164 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm43914-201ENSMUST00000203592 594 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Trim28Q62318 Gm35262-201ENSMUST00000215133 267 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim28Q62318 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Mir19a-201ENSMUST00000083482 82 ntBASIC4.35□□□□□ -1.71
Trim28Q62318 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim28Q62318 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim28Q62318 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim28Q62318 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim28Q62318 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim28Q62318 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim28Q62318 Mir466h-201ENSMUST00000104748 81 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm11576-201ENSMUST00000117433 417 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm8840-201ENSMUST00000122454 386 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm20415-201ENSMUST00000172877 423 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm20672-201ENSMUST00000176605 261 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim28Q62318 Mir6401-201ENSMUST00000184499 109 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm27249-201ENSMUST00000185049 328 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim28Q62318 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim28Q62318 Gm45173-201ENSMUST00000206819 305 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms